Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.93□□□□□ -1.78
PROM1O43490 SNORA19.2-201ENST00000516013 114 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.93□□□□□ -1.78
PROM1O43490 AP003730.1-201ENST00000524605 285 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.93□□□□□ -1.78
PROM1O43490 DEFB108D-201ENST00000527787 222 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.93□□□□□ -1.78
PROM1O43490 PSMA3P-201ENST00000555485 635 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AL121821.2-201ENST00000556081 394 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AL669831.4-202ENST00000590817 238 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.93□□□□□ -1.78
PROM1O43490 AC104237.2-201ENST00000612456 443 ntBASIC3.93□□□□□ -1.78
PROM1O43490 MIR8059-201ENST00000620427 81 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.93□□□□□ -1.78
PROM1O43490 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.93□□□□□ -1.78
PROM1O43490 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PROM1O43490 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PROM1O43490 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.93□□□□□ -1.78
PROM1O43490 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
PROM1O43490 AC066616.2-201ENST00000559334 1481 ntBASIC3.92□□□□□ -1.78
PROM1O43490 TAB3P1-202ENST00000452645 1634 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PROM1O43490 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PROM1O43490 Y_RNA.384-201ENST00000383909 102 ntBASIC3.92□□□□□ -1.78
PROM1O43490 RNU1-13P-201ENST00000384499 162 ntBASIC3.92□□□□□ -1.78
PROM1O43490 MIR514A2-201ENST00000385131 88 ntBASIC3.92□□□□□ -1.78
PROM1O43490 MIR514A3-201ENST00000385132 88 ntBASIC3.92□□□□□ -1.78
PROM1O43490 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.92□□□□□ -1.78
PROM1O43490 RNA5SP317-201ENST00000410176 116 ntBASIC3.92□□□□□ -1.78
PROM1O43490 RNU2-29P-201ENST00000410423 189 ntBASIC3.92□□□□□ -1.78
PROM1O43490 RN7SKP140-201ENST00000411196 284 ntBASIC3.92□□□□□ -1.78
PROM1O43490 RNA5SP311-201ENST00000411290 116 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.92□□□□□ -1.78
PROM1O43490 UBE2FP1-201ENST00000416536 447 ntBASIC3.92□□□□□ -1.78
PROM1O43490 NCOR1P3-201ENST00000420479 303 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AF228730.4-201ENST00000421457 183 ntBASIC3.92□□□□□ -1.78
PROM1O43490 RPL23AP38-201ENST00000423801 469 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.92□□□□□ -1.78
PROM1O43490 HMGB1P18-201ENST00000438801 619 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AC005094.1-201ENST00000440420 368 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.92□□□□□ -1.78
PROM1O43490 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.92□□□□□ -1.78
PROM1O43490 AC007967.1-201ENST00000455422 1159 ntBASIC3.92□□□□□ -1.78
PROM1O43490 CEACAMP4-201ENST00000457676 421 ntBASIC3.92□□□□□ -1.78
PROM1O43490 snoU13.22-201ENST00000459428 104 ntBASIC3.92□□□□□ -1.78
PROM1O43490 RNU6-329P-201ENST00000459618 107 ntBASIC3.92□□□□□ -1.78
PROM1O43490 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PROM1O43490 RPS15AP36-201ENST00000492022 382 ntBASIC3.92□□□□□ -1.78
PROM1O43490 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.92□□□□□ -1.78
PROM1O43490 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.92□□□□□ -1.78
PROM1O43490 RNU6-277P-201ENST00000516272 106 ntBASIC3.92□□□□□ -1.78
PROM1O43490 RNA5SP315-201ENST00000516340 116 ntBASIC3.92□□□□□ -1.78
PROM1O43490 RNA5SP312-201ENST00000517068 116 ntBASIC3.92□□□□□ -1.78
PROM1O43490 RN7SKP256-201ENST00000517201 314 ntBASIC3.92□□□□□ -1.78
PROM1O43490 RPL7P20-201ENST00000520308 745 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AP005435.4-201ENST00000529514 284 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.92□□□□□ -1.78
PROM1O43490 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.92□□□□□ -1.78
PROM1O43490 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.92□□□□□ -1.78
PROM1O43490 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.92□□□□□ -1.78
PROM1O43490 AC022655.2-201ENST00000577280 318 ntBASIC3.92□□□□□ -1.78
PROM1O43490 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.92□□□□□ -1.78
PROM1O43490 MIR4703-201ENST00000577728 79 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.92□□□□□ -1.78
PROM1O43490 AL591034.3-201ENST00000605511 685 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AC103710.3-201ENST00000608157 948 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AC006023.2-201ENST00000609916 167 ntBASIC3.92□□□□□ -1.78
PROM1O43490 AL603758.1-201ENST00000618654 241 ntBASIC3.92□□□□□ -1.78
PROM1O43490 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PROM1O43490 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.92□□□□□ -1.78
PROM1O43490 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PROM1O43490 FAM35DP-201ENST00000323387 2712 ntBASIC3.92□□□□□ -1.78
PROM1O43490 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PROM1O43490 AL645937.1-201ENST00000641739 1652 ntBASIC3.91□□□□□ -1.78
PROM1O43490 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PROM1O43490 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.91□□□□□ -1.78
PROM1O43490 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PROM1O43490 FRG1CP-201ENST00000358464 769 ntBASIC3.91□□□□□ -1.78
PROM1O43490 RNA5SP322-201ENST00000363617 119 ntBASIC3.91□□□□□ -1.78
PROM1O43490 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PROM1O43490 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PROM1O43490 RNU6-38P-201ENST00000384085 107 ntBASIC3.91□□□□□ -1.78
PROM1O43490 Y_RNA.431-201ENST00000384086 102 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AL109755.1-201ENST00000401791 649 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AL022722.2-201ENST00000402519 180 ntBASIC3.91□□□□□ -1.78
PROM1O43490 RNU6-628P-201ENST00000410675 107 ntBASIC3.91□□□□□ -1.78
PROM1O43490 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.91□□□□□ -1.78
PROM1O43490 AL354751.2-201ENST00000415471 210 ntBASIC3.91□□□□□ -1.78
PROM1O43490 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.91□□□□□ -1.78
PROM1O43490 AL451054.2-201ENST00000420896 202 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.91□□□□□ -1.78
PROM1O43490 MTCO2P12-201ENST00000427426 682 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AC093106.2-201ENST00000428212 385 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.91□□□□□ -1.78
PROM1O43490 AC006011.1-201ENST00000442758 349 ntBASIC3.91□□□□□ -1.78
PROM1O43490 HSFY6P-201ENST00000445573 403 ntBASIC3.91□□□□□ -1.78
PROM1O43490 SNRPFP3-201ENST00000457792 225 ntBASIC3.91□□□□□ -1.78
PROM1O43490 RNU6-333P-201ENST00000459117 107 ntBASIC3.91□□□□□ -1.78
PROM1O43490 HMGB1P25-201ENST00000468402 607 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms