Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNU6-1097P-201ENST00000363586 107 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 RNA5SP515-201ENST00000364570 118 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 RNA5SP479-201ENST00000364858 117 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 Y_RNA.367-201ENST00000365544 101 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 RNU6-108P-201ENST00000365558 107 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXN3O00409 AC009237.5-201ENST00000414271 501 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 AC114491.1-201ENST00000416095 246 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXN3O00409 AL353193.1-201ENST00000421444 268 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 MED13P1-201ENST00000428342 171 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 AC007919.1-201ENST00000429380 217 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 RPS29P7-201ENST00000439662 171 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXN3O00409 NFU1P2-201ENST00000448700 469 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 AC023598.1-201ENST00000472521 361 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 FAM92A1P2-202ENST00000504766 877 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 AC117522.1-201ENST00000509821 380 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 RN7SKP21-201ENST00000516503 220 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.96□□□□□ -1.78
FOXN3O00409 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXN3O00409 AP001893.2-201ENST00000526949 202 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
FOXN3O00409 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXN3O00409 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.96□□□□□ -1.78
FOXN3O00409 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.96□□□□□ -1.78
FOXN3O00409 AC007619.2-201ENST00000605743 379 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.96□□□□□ -1.78
FOXN3O00409 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.96□□□□□ -1.78
FOXN3O00409 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXN3O00409 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
FOXN3O00409 AL359880.1-201ENST00000621879 266 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 AC022140.2-201ENST00000623500 188 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 AL008636.1-201ENST00000625038 1018 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 AC005609.4-201ENST00000625071 447 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 AC068724.3-201ENST00000625906 87 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXN3O00409 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.96□□□□□ -1.78
FOXN3O00409 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXN3O00409 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.95□□□□□ -1.78
FOXN3O00409 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXN3O00409 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
FOXN3O00409 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.95□□□□□ -1.78
FOXN3O00409 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXN3O00409 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXN3O00409 PRO1804-201ENST00000623780 2050 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXN3O00409 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXN3O00409 RNU6-288P-201ENST00000363690 104 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 SNORA62.1-201ENST00000364287 154 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 SMIM11P1-201ENST00000369586 178 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.95□□□□□ -1.78
FOXN3O00409 AL591416.1-201ENST00000404015 867 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 HMGB3P20-201ENST00000417997 600 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 AL451054.2-201ENST00000420896 202 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
FOXN3O00409 USP9YP18-201ENST00000425912 695 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.95□□□□□ -1.78
FOXN3O00409 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.95□□□□□ -1.78
FOXN3O00409 MTATP6P16-201ENST00000434543 526 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
FOXN3O00409 AC020550.1-201ENST00000447385 163 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 WASF1P1-201ENST00000447560 1131 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.95□□□□□ -1.78
FOXN3O00409 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.95□□□□□ -1.78
FOXN3O00409 AC022364.2-201ENST00000457963 554 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.95□□□□□ -1.78
FOXN3O00409 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.95□□□□□ -1.78
FOXN3O00409 AP001646.1-201ENST00000527936 915 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.95□□□□□ -1.78
FOXN3O00409 SNORA59B-202ENST00000578183 701 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 MIR5187-201ENST00000583479 76 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 KLKP1-201ENST00000595979 403 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 AL158032.1-201ENST00000605401 106 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXN3O00409 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXN3O00409 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXN3O00409 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXN3O00409 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
FOXN3O00409 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXN3O00409 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
FOXN3O00409 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
FOXN3O00409 HSPA8P1-201ENST00000425843 1833 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 AF117829.1-206ENST00000621883 3802 ntBASIC3.95□□□□□ -1.78
FOXN3O00409 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXN3O00409 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXN3O00409 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN3O00409 AP004289.2-201ENST00000444413 1457 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN3O00409 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN3O00409 RNU6-1085P-201ENST00000363576 107 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 RNU6-283P-201ENST00000364788 107 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 RNU6-946P-201ENST00000383878 107 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXN3O00409 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXN3O00409 ELOCP14-201ENST00000428070 331 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 HMGB1P27-201ENST00000431429 603 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXN3O00409 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXN3O00409 HMGN2P20-201ENST00000437531 273 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms