Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC019226.2-201ENST00000625973 424 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 SGO1P2-201ENST00000429458 1589 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 ZNF658B-202ENST00000615961 3375 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC011477.1-204ENST00000623416 1325 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC104454.1-201ENST00000421341 1401 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU6-1249P-201ENST00000363237 111 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 SNORA4.1-201ENST00000364263 144 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU6-878P-201ENST00000384578 110 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 MIR1250-201ENST00000408098 113 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 BX682237.1-201ENST00000415016 335 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC011233.1-201ENST00000422812 283 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL593851.1-201ENST00000426171 157 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL117351.1-201ENST00000438864 766 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC104389.3-201ENST00000445629 235 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 MTCO1P27-201ENST00000448269 226 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 MTCO2P6-201ENST00000463134 685 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC068587.2-201ENST00000478386 781 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC009901.1-201ENST00000506703 541 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC026407.1-201ENST00000518369 204 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC109635.4-202ENST00000531666 412 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC243972.3-201ENST00000539655 198 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 SETP7-201ENST00000552169 453 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC136618.2-201ENST00000575091 400 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC079089.3-201ENST00000603094 673 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC021171.1-201ENST00000603137 706 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL355812.1-201ENST00000603215 216 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL031281.1-201ENST00000604049 488 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC007938.3-201ENST00000604965 623 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC080013.4-201ENST00000607624 649 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL360219.1-201ENST00000610230 366 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL357080.1-201ENST00000617394 239 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL596245.1-201ENST00000618994 362 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC002064.3-201ENST00000623448 346 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC231657.1-201ENST00000624313 397 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC244517.1-201ENST00000606030 2086 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC097714.1-201ENST00000511272 1647 ntBASIC2.46□□□□□ -2.02
TMX2-CTNND1H3BSU7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU6-712P-201ENST00000410558 100 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU2-15P-201ENST00000410692 191 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU4-53P-201ENST00000410828 140 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL445669.1-201ENST00000426743 755 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 MTATP6P4-201ENST00000427725 675 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 SUMO1P4-201ENST00000429430 302 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 MTND4P6-201ENST00000438297 472 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 ARPC3P5-201ENST00000448802 534 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 MTND2P19-201ENST00000449129 1012 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 RPS24P6-201ENST00000452670 400 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL109741.2-201ENST00000455561 343 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 BX322784.1-201ENST00000455793 1077 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 HMGB1P36-201ENST00000487709 576 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC098862.1-201ENST00000504991 413 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU6-150P-201ENST00000516237 95 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC125611.2-201ENST00000551907 647 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC135628.1-201ENST00000568867 534 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC018638.7-201ENST00000605836 1114 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC018755.4-201ENST00000619715 454 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TMX2-CTNND1H3BSU7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 XGY1-201ENST00000381172 446 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 FO393413.1-201ENST00000402892 195 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms