Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RCCD1A6NED2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RCCD1A6NED2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RCCD1A6NED2 Y_RNA.215-201ENST00000364204 112 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 RNU6-215P-201ENST00000365169 102 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RCCD1A6NED2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.78□□□□□ -1.48
RCCD1A6NED2 RAB9AP3-201ENST00000412737 573 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.78□□□□□ -1.48
RCCD1A6NED2 CKS1BP5-201ENST00000434172 273 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.78□□□□□ -1.48
RCCD1A6NED2 RPL12P46-201ENST00000436610 195 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 RAB9AP1-201ENST00000449393 573 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 AL450023.1-201ENST00000450868 751 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 RPS5P7-201ENST00000456664 608 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 AC108043.1-201ENST00000512696 574 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.78□□□□□ -1.48
RCCD1A6NED2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.78□□□□□ -1.48
RCCD1A6NED2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.78□□□□□ -1.48
RCCD1A6NED2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.78□□□□□ -1.48
RCCD1A6NED2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.78□□□□□ -1.48
RCCD1A6NED2 AP005431.1-201ENST00000618479 319 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 AC006001.4-201ENST00000622243 395 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RCCD1A6NED2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RCCD1A6NED2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
RCCD1A6NED2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RCCD1A6NED2 AP005432.1-201ENST00000580891 3485 ntBASIC5.78□□□□□ -1.48
RCCD1A6NED2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
RCCD1A6NED2 AC026951.1-201ENST00000559530 2459 ntBASIC5.77□□□□□ -1.48
RCCD1A6NED2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
RCCD1A6NED2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RCCD1A6NED2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RCCD1A6NED2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RCCD1A6NED2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.77□□□□□ -1.49
RCCD1A6NED2 RNA5SP361-201ENST00000362686 118 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 Y_RNA.245-201ENST00000364493 95 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 Y_RNA.353-201ENST00000365440 108 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 RNU6-20P-201ENST00000384106 107 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 AL357139.1-201ENST00000407792 426 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 RN7SKP16-201ENST00000410180 299 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 MRPS10P1-201ENST00000448483 130 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.77□□□□□ -1.49
RCCD1A6NED2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.77□□□□□ -1.49
RCCD1A6NED2 RNU6-567P-201ENST00000516746 107 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 SNORA31.19-201ENST00000517079 126 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 AC005828.6-201ENST00000606610 232 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 AC018445.2-201ENST00000622987 260 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.77□□□□□ -1.49
RCCD1A6NED2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.77□□□□□ -1.49
RCCD1A6NED2 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RCCD1A6NED2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
RCCD1A6NED2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.77□□□□□ -1.49
RCCD1A6NED2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.77□□□□□ -1.49
RCCD1A6NED2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RCCD1A6NED2 AL079305.1-201ENST00000623159 3008 ntBASIC5.77□□□□□ -1.49
RCCD1A6NED2 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RCCD1A6NED2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 AC004817.4-201ENST00000602396 3625 ntBASIC5.76□□□□□ -1.49
RCCD1A6NED2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 RNA5SP205-201ENST00000364653 136 ntBASIC5.76□□□□□ -1.49
RCCD1A6NED2 Y_RNA.273-201ENST00000364703 102 ntBASIC5.76□□□□□ -1.49
RCCD1A6NED2 RNU6-1175P-201ENST00000365200 107 ntBASIC5.76□□□□□ -1.49
RCCD1A6NED2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 AC091390.3-201ENST00000426478 338 ntBASIC5.76□□□□□ -1.49
RCCD1A6NED2 AC007560.1-201ENST00000426912 237 ntBASIC5.76□□□□□ -1.49
RCCD1A6NED2 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 AC096638.1-201ENST00000444678 216 ntBASIC5.76□□□□□ -1.49
RCCD1A6NED2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 AC144530.1-201ENST00000452862 555 ntBASIC5.76□□□□□ -1.49
RCCD1A6NED2 ENPP7P11-201ENST00000505915 627 ntBASIC5.76□□□□□ -1.49
RCCD1A6NED2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 MIR6839-201ENST00000620425 113 ntBASIC5.76□□□□□ -1.49
RCCD1A6NED2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RCCD1A6NED2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.76□□□□□ -1.49
RCCD1A6NED2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RCCD1A6NED2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.75□□□□□ -1.49
RCCD1A6NED2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.75□□□□□ -1.49
RCCD1A6NED2 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RCCD1A6NED2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RCCD1A6NED2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
RCCD1A6NED2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RCCD1A6NED2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms