Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 RNA5SP124-201ENST00000362739 110 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 SNORD81.2-201ENST00000365153 76 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 MIR199A2-201ENST00000385289 110 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 RNA5SP171-201ENST00000391071 115 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC110754.1-201ENST00000399740 601 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 TXNP7-201ENST00000406296 293 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AL606923.1-201ENST00000406616 190 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 OR6C66P-201ENST00000414917 930 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC068533.1-201ENST00000418542 415 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 PDCL2P1-201ENST00000419302 352 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 RPL35AP12-201ENST00000425362 338 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 MTCO3P46-201ENST00000425787 232 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC093106.2-201ENST00000428212 385 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AL118520.1-201ENST00000450770 291 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AL162395.1-201ENST00000457882 422 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 HMGN2P26-201ENST00000463169 339 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC091885.1-201ENST00000506658 268 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC022690.1-201ENST00000526681 550 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 GLYCAM1-201ENST00000546596 285 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 VN1R80P-201ENST00000597126 338 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AL356055.1-201ENST00000602528 446 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 RNU6-89P-201ENST00000606519 100 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AL121772.2-201ENST00000614331 297 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC004696.1-201ENST00000614345 607 ntBASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPDC1A2A3K4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 XIAPP3-201ENST00000312918 795 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 Y_RNA.813-201ENST00000364639 102 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 SNORD115-7-201ENST00000365306 82 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 RNU4-20P-201ENST00000365601 151 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 Y_RNA.529-201ENST00000384586 119 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 RNU1-89P-201ENST00000384592 164 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 MIR200C-201ENST00000384980 68 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 RNU6-510P-201ENST00000391239 108 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 SNORA57.3-201ENST00000411095 141 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 RNU6-387P-201ENST00000411331 105 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 CYCSP43-201ENST00000438233 310 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AL133547.1-201ENST00000448546 220 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 VWA8P1-201ENST00000510889 176 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 RNA5SP208-201ENST00000516156 78 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 TRMT10BP1-201ENST00000519377 943 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 DEFB109D-201ENST00000529497 240 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AC078814.3-201ENST00000553036 491 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 SNORD84-203ENST00000584275 78 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AC009248.2-201ENST00000619826 254 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AL353748.2-201ENST00000622148 471 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AC112487.2-201ENST00000637950 304 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 AL365440.1-201ENST00000436135 2167 ntBASIC4.5□□□□□ -1.69
PTPDC1A2A3K4 API5P2-201ENST00000397055 1498 ntBASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 RNU4-66P-201ENST00000365199 138 ntBASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 SMIM11P1-201ENST00000369586 178 ntBASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 RNU6-38P-201ENST00000384085 107 ntBASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 Y_RNA.576-201ENST00000384781 102 ntBASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 SOD2P1-201ENST00000396543 562 ntBASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 RN7SKP32-201ENST00000410167 303 ntBASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 AC244098.2-201ENST00000422068 99 ntBASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 AL365400.1-201ENST00000431854 640 ntBASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPDC1A2A3K4 SNRPFP3-201ENST00000457792 225 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms