Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 SUMO2P6-201ENST00000505273 288 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC010460.2-201ENST00000509054 677 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 COL6A4P2-205ENST00000509855 506 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 snoZ278.1-201ENST00000517059 112 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC125611.1-201ENST00000549563 229 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC135628.1-201ENST00000568867 534 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC138915.2-201ENST00000569776 97 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 OR4K7P-201ENST00000580232 945 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AP001542.2-201ENST00000593141 364 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 DUXAP11-201ENST00000603858 526 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC004853.1-201ENST00000604902 698 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AP005229.2-201ENST00000609980 697 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC010378.1-201ENST00000619270 362 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 MTND4P27-201ENST00000450813 1354 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 FAM133CP-201ENST00000332869 704 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 RNU5A-1-201ENST00000362698 116 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 RNU6-76P-201ENST00000384060 104 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 RNU4-52P-201ENST00000384209 138 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 RNU6-301P-201ENST00000384277 107 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 RNU6-1300P-201ENST00000391046 108 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AL356131.1-201ENST00000405826 414 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 HMGB1P11-201ENST00000413899 637 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AL592310.1-201ENST00000414330 671 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 MTND1P23-201ENST00000416931 372 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 FAM204CP-201ENST00000424489 642 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC092393.1-201ENST00000439625 742 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC026410.2-201ENST00000460281 156 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC104435.1-201ENST00000483483 166 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AL049874.1-201ENST00000489560 388 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 GTF2IP9-201ENST00000502460 301 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC023141.11-201ENST00000508864 202 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC093677.1-201ENST00000514414 678 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 RNU5F-8P-201ENST00000515941 111 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 SCARNA17.1-201ENST00000516211 143 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 SCARNA17.2-201ENST00000516334 143 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 RNU6-334P-201ENST00000517072 102 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC087465.1-201ENST00000560574 245 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC021749.1-201ENST00000604322 607 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AL121917.1-203ENST00000605534 577 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC013412.1-201ENST00000610687 192 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 SCARNA17.4-201ENST00000614296 143 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC084824.4-201ENST00000620106 731 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC007785.2-201ENST00000598627 1916 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.66□□□□□ -2.14
TRAV41A0A0B4J266 AC007336.1-201ENST00000576365 3828 ntBASIC1.65□□□□□ -2.14
TRAV41A0A0B4J266 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
TRAV41A0A0B4J266 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
TRAV41A0A0B4J266 OR4G2P-202ENST00000641004 1759 ntBASIC1.65□□□□□ -2.14
TRAV41A0A0B4J266 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-707P-201ENST00000364647 95 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-468P-201ENST00000384003 109 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 SNORA70B-201ENST00000384210 135 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 SNORA64-201ENST00000384674 134 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 MIR514A1-201ENST00000385133 98 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-220P-201ENST00000390919 107 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 SNRPEP2-201ENST00000397592 279 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 DHFRP6-201ENST00000401776 268 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 NPM1P11-201ENST00000417106 855 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 HMGB1P49-201ENST00000418882 569 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms