Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 RNU7-169P-201ENST00000459456 61 ntBASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 TRBVB-201ENST00000477100 408 ntBASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 AC023632.4-201ENST00000517783 191 ntBASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 AC022080.3-201ENST00000544433 482 ntBASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 AC137627.1-201ENST00000545761 289 ntBASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 TRAV32-201ENST00000553993 340 ntBASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 AC067852.4-201ENST00000590314 478 ntBASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 AC012603.1-201ENST00000606424 528 ntBASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 SNORD39.4-201ENST00000620099 78 ntBASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.31□□□□□ -1.56
HCN4Q9Y3Q4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 RNA5SP52-201ENST00000362448 134 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 Y_RNA.183-201ENST00000363882 113 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 U8.8-201ENST00000365399 135 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 Y_RNA.416-201ENST00000384014 113 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 SNORA70C-201ENST00000384538 135 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 MIR554-201ENST00000384874 96 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 RN7SKP106-201ENST00000410832 272 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 RN7SKP100-201ENST00000411258 284 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 RAC1P3-201ENST00000416129 580 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 RPL23AP2-201ENST00000471227 466 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 RPS15AP34-201ENST00000487776 387 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 HMGB1P35-201ENST00000503360 598 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 RNU6-397P-201ENST00000516226 104 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 RNU6-840P-201ENST00000517275 65 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 AC004584.2-201ENST00000570407 410 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 MIR5701-3-201ENST00000578890 82 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 MIR4444-1-201ENST00000581696 74 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 MIR4444-2-201ENST00000584390 74 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 MIR5701-1-201ENST00000585138 82 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 AC006130.2-201ENST00000586202 326 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 AC008962.1-201ENST00000605729 304 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 AC034102.8-201ENST00000615146 484 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 MIR5701-2-201ENST00000615634 82 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 MAPK10-304ENST00000641341 3984 ntBASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HCN4Q9Y3Q4 AC005005.4-201ENST00000623789 16698 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 GVINP1-202ENST00000531871 7271 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 AC092681.1-201ENST00000297369 291 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 RNU6-212P-201ENST00000362642 104 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 RNA5SP447-201ENST00000363749 119 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 RNA5SP428-201ENST00000365129 132 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 SNORA70.6-201ENST00000383934 134 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 AL513475.1-201ENST00000406602 315 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 U3.42-201ENST00000408746 214 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 AC079809.1-201ENST00000415468 276 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 LINC02210-201ENST00000444561 288 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 AL392103.1-201ENST00000447000 198 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 RNU6-570P-201ENST00000517051 105 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 AC034114.1-201ENST00000520293 285 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 RN7SL690P-201ENST00000582087 240 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 AL121917.1-203ENST00000605534 577 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 SNORD91B-202ENST00000608459 222 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms