Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
LHX6Q9UPM6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LHX6Q9UPM6 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LHX6Q9UPM6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LHX6Q9UPM6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LHX6Q9UPM6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LHX6Q9UPM6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LHX6Q9UPM6 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.81□□□□□ -1.48
LHX6Q9UPM6 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
LHX6Q9UPM6 AC090971.4-201ENST00000560291 1800 ntBASIC5.81□□□□□ -1.48
LHX6Q9UPM6 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LHX6Q9UPM6 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LHX6Q9UPM6 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 RNA5SP333-201ENST00000363466 118 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 RNA5SP334-201ENST00000364825 118 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 SNORD58C-201ENST00000365223 64 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 MT-TT-201ENST00000387460 66 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 AL606845.1-201ENST00000404881 255 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 RPS12P17-201ENST00000438591 377 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 AC243964.1-201ENST00000441814 261 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 HMGB3P8-201ENST00000449709 577 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 AL122020.1-201ENST00000472287 459 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 RNU6-572P-201ENST00000516724 80 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 RN7SL708P-201ENST00000580952 299 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 AL356157.2-201ENST00000605122 111 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 MRPL57P1-201ENST00000621486 265 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 SNORA43.4-201ENST00000629559 138 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 MIR4496-201ENST00000635896 61 ntBASIC5.8□□□□□ -1.48
LHX6Q9UPM6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LHX6Q9UPM6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 RNA5SP46-201ENST00000362370 120 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 Y_RNA.179-201ENST00000363844 90 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 RNU6-1082P-201ENST00000364574 107 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 RNU6-49P-201ENST00000384256 107 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 MIR223-201ENST00000385204 110 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 DDX39BP1-205ENST00000422507 192 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 CYCSP52-201ENST00000422857 310 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 RPL23AP95-201ENST00000426806 265 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 AL139148.1-201ENST00000427122 680 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 AC091390.1-201ENST00000433904 331 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 RN7SL714P-201ENST00000487050 298 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 TOMM22P4-201ENST00000511318 336 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 RPL23AP53-201ENST00000521854 457 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 FKBP1AP1-201ENST00000594588 318 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 AC062037.1-201ENST00000605302 128 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 MIR3674-201ENST00000636576 68 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 AL596275.2-206ENST00000641957 626 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 AC087516.1-201ENST00000561236 2428 ntBASIC5.79□□□□□ -1.48
LHX6Q9UPM6 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LHX6Q9UPM6 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX6Q9UPM6 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms