Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MIR3146-201ENST00000580367 79 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC068790.3-201ENST00000602988 553 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC011816.2-201ENST00000607089 556 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AL590282.1-201ENST00000610379 1136 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC243312.2-201ENST00000623340 601 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC091903.1-201ENST00000624322 454 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 SNORA51.2-201ENST00000364595 132 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6-1283P-201ENST00000365314 105 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 MTCO3P40-201ENST00000392516 676 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AL590002.1-201ENST00000406554 418 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 RNU2-8P-201ENST00000410727 190 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 BX842559.1-201ENST00000419615 532 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 MTCO2P11-201ENST00000431069 680 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AC091286.1-201ENST00000431233 461 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 HMGB1P12-201ENST00000438594 598 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 RPL21P23-201ENST00000446654 460 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AC013267.1-201ENST00000458227 267 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 RN7SL75P-201ENST00000461926 281 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 ST13P14-201ENST00000474095 734 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 Vault.3-201ENST00000516676 95 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6-1220P-201ENST00000517126 108 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AC245166.1-201ENST00000521012 253 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 OR5B10P-201ENST00000532869 642 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 SYF2P1-201ENST00000550658 413 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 MIR3167-201ENST00000579623 85 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 MIR3690-201ENST00000580266 75 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AL606834.2-201ENST00000602954 668 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 uc_338.1-201ENST00000612113 180 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AC007014.2-201ENST00000615581 479 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AC073534.2-201ENST00000620377 381 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AC073476.4-201ENST00000628409 72 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AC093831.2-201ENST00000624393 3427 ntBASIC3.44□□□□□ -1.86
SMARCAL1Q9NZC9 AL356274.2-201ENST00000624379 3752 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AL161912.2-201ENST00000565707 3007 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6-181P-201ENST00000363225 107 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC244098.2-201ENST00000422068 99 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC233728.2-201ENST00000425348 757 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 USP9YP18-201ENST00000425912 695 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 OR4K11P-201ENST00000431829 904 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC119618.1-201ENST00000434191 222 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC132479.1-201ENST00000449160 144 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 snoU109.4-201ENST00000458953 143 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 VN1R17P-201ENST00000472048 1090 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC093278.1-201ENST00000494700 600 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 HMGB1P29-201ENST00000505659 499 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC009646.1-201ENST00000510455 318 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6-798P-201ENST00000516912 103 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6-528P-201ENST00000516926 100 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6-445P-201ENST00000516949 107 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 IGKV2D-19-201ENST00000523346 262 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC092325.1-201ENST00000566449 554 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC015917.1-201ENST00000579654 510 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 MIR3158-1-201ENST00000583596 81 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 MIR3922-201ENST00000585192 84 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 SNRPGP15-201ENST00000600149 222 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AC012669.1-201ENST00000603209 283 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 U73479.1-201ENST00000618062 168 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AL359880.1-201ENST00000621879 266 ntBASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms