Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 Y_RNA.534-201ENST00000384599 112 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 AL590002.1-201ENST00000406554 418 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 RNU2-29P-201ENST00000410423 189 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 RPL26P29-201ENST00000415623 438 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 AC068533.1-201ENST00000418542 415 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 AL596276.1-201ENST00000434465 418 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 RPL21P133-201ENST00000443666 476 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 AC126182.1-201ENST00000478134 357 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 AC069499.1-201ENST00000489433 509 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 RPL7P47-201ENST00000497299 556 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 AC109927.2-201ENST00000506416 303 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 RNU6-685P-201ENST00000517088 95 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 AP000867.2-201ENST00000532468 320 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 AL512360.1-201ENST00000555346 234 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 AC092794.1-201ENST00000612734 582 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 DUSP12P1-201ENST00000612874 516 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 MIR8058-201ENST00000615737 89 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 AC011155.2-201ENST00000623202 216 ntBASIC4.19□□□□□ -1.74
DDX56Q9NY93 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
DDX56Q9NY93 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
DDX56Q9NY93 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
DDX56Q9NY93 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX56Q9NY93 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
DDX56Q9NY93 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
DDX56Q9NY93 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
DDX56Q9NY93 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DDX56Q9NY93 OR4G2P-201ENST00000328113 903 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 Y_RNA.372-201ENST00000365599 102 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 Y_RNA.409-201ENST00000383990 98 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 RNU6-1029P-201ENST00000384109 107 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 CISD1P1-201ENST00000393907 327 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 CALM2P3-201ENST00000400429 449 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 MIR888-201ENST00000401186 77 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 RNU4-46P-201ENST00000410818 138 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 RPL37P18-201ENST00000411602 243 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 NEK4P1-201ENST00000433383 879 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 RPL7P54-201ENST00000438336 674 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 HMGB3P8-201ENST00000449709 577 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 RNU6-261P-201ENST00000459506 102 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 RPL21P8-201ENST00000465083 535 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 RN7SL459P-201ENST00000481078 302 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 AC105137.1-201ENST00000484355 562 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 AL117351.2-201ENST00000513571 157 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 SNORD59.2-201ENST00000516873 68 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 CDH12P4-201ENST00000517835 295 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 CDH12P3-201ENST00000517935 295 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 CDH12P1-201ENST00000518435 295 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 HMGB1P33-201ENST00000563485 527 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 AL355598.1-201ENST00000604169 202 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
DDX56Q9NY93 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.18□□□□□ -1.74
DDX56Q9NY93 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DDX56Q9NY93 UBE3AP2-201ENST00000429033 2259 ntBASIC4.18□□□□□ -1.74
DDX56Q9NY93 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX56Q9NY93 MTND4P14-201ENST00000435799 1354 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 Y_RNA.9-201ENST00000362354 101 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX56Q9NY93 MIR585-201ENST00000384887 94 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 MIR548F1-201ENST00000408667 84 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AMD1P2-201ENST00000412936 992 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 RPL30P2-201ENST00000414021 291 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 OR6C66P-201ENST00000414917 930 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AL353193.1-201ENST00000421444 268 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 MTCYBP5-201ENST00000423752 1135 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 MTCO3P30-201ENST00000426425 670 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 HMGB1P37-201ENST00000439613 609 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 NUTF2P3-201ENST00000448540 384 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms