Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MIR550A3-201ENST00000390735 95 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 RNU6-332P-201ENST00000391193 108 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AC080125.1-201ENST00000414888 684 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 BTF3L4P3-201ENST00000418879 476 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AL356387.2-201ENST00000422272 243 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AL590383.1-201ENST00000428602 75 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AC087650.1-201ENST00000431445 468 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 NEK4P1-201ENST00000433383 879 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 KCTD9P3-201ENST00000434597 1169 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 RN7SL691P-201ENST00000494487 301 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 MTCO2P30-201ENST00000503662 364 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AC091885.1-201ENST00000506658 268 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 MTND4P7-201ENST00000523876 130 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 PSMA2P1-201ENST00000526365 646 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AL137161.1-201ENST00000532231 390 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 MIR4436B2-201ENST00000581415 91 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 MIR4436B1-201ENST00000583272 91 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AC018638.8-201ENST00000588755 281 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AC013553.2-201ENST00000604244 589 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 RNU6-89P-201ENST00000606519 100 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AL390240.1-201ENST00000612950 384 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 uc_338.34-201ENST00000617467 174 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 U6.98-201ENST00000637157 84 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 FAM35DP-201ENST00000323387 2712 ntBASIC4.12□□□□□ -1.75
MKS1Q9NXB0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
MKS1Q9NXB0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 RNU4-66P-201ENST00000365199 138 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 RNA5SP111-201ENST00000411386 101 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 FAR2P2-201ENST00000413041 594 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC104058.1-201ENST00000448028 297 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 PPIAP15-201ENST00000479662 484 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 RPL21P99-201ENST00000480369 423 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 RN7SL271P-201ENST00000487601 295 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC098799.2-201ENST00000509466 868 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 TTC39CP1-201ENST00000512513 755 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 APOOP4-201ENST00000513530 597 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 Y_RNA.702-201ENST00000516843 96 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 RNA5SP471-201ENST00000516971 106 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 ATP5F1P5-201ENST00000526403 760 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 BNIP3P6-201ENST00000549284 499 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC078814.3-201ENST00000553036 491 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC107294.1-201ENST00000609524 467 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AL049539.1-201ENST00000611964 459 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 XIST_intron.1-201ENST00000619444 68 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 AC100810.6-201ENST00000638068 285 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 IPO8P1-201ENST00000455509 3109 ntBASIC4.11□□□□□ -1.75
MKS1Q9NXB0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MKS1Q9NXB0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 Y_RNA.72-201ENST00000362894 103 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 RNU6-1167P-201ENST00000363227 94 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 Y_RNA.279-201ENST00000364763 95 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 MIR493-201ENST00000385254 89 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 U3.42-201ENST00000408746 214 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AC007390.1-201ENST00000415722 356 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AC245054.1-201ENST00000420944 258 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AL513185.2-201ENST00000425543 193 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AL451062.2-201ENST00000427515 271 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 ERLEC1P1-201ENST00000433806 578 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms