Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 RPL36AP41-201ENST00000493820 306 ntBASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 HMGB3P16-201ENST00000508037 287 ntBASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 RN7SKP60-201ENST00000516985 239 ntBASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 SUB1P3-201ENST00000564581 315 ntBASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 AC125232.2-201ENST00000592457 143 ntBASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 AL355812.1-201ENST00000603215 216 ntBASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 AC104763.2-201ENST00000604179 382 ntBASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 HMGB1P50-201ENST00000605814 607 ntBASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 AP005019.3-201ENST00000620418 560 ntBASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 AC107068.1-201ENST00000563286 4218 ntBASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.88□□□□□ -1.63
ATXN3LQ9H3M9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 OR14L1P-202ENST00000641545 3009 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 MTND5P27-201ENST00000428871 1720 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 RNU6-288P-201ENST00000363690 104 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 SNORD14.1-201ENST00000365609 90 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 RNU6-14P-201ENST00000384630 106 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 MIR135A2-201ENST00000384854 100 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 RPL21P1-201ENST00000399532 476 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AC097374.1-203ENST00000400783 485 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 MIR1252-201ENST00000408861 65 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 EIF4HP2-201ENST00000424380 563 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 RPL12P34-201ENST00000424532 479 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AL645568.3-201ENST00000433683 316 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 HSFY6P-201ENST00000445573 403 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 CHEK2P4-201ENST00000450340 246 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 RPL37P6-202ENST00000464216 403 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 RNU6-352P-201ENST00000516908 107 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 Y_RNA.715-201ENST00000517082 110 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AC104576.1-201ENST00000524225 88 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AP000889.1-201ENST00000530968 660 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 FKBP1BP1-201ENST00000553366 325 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AC105129.1-201ENST00000560250 297 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AC174048.1-201ENST00000603389 144 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 Z98751.3-201ENST00000604447 521 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 AC015967.1-201ENST00000619893 476 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 MIR6830-201ENST00000636015 70 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 SALL4P2-201ENST00000423288 2910 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 RAD17P1-201ENST00000418130 2042 ntBASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATXN3LQ9H3M9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 AL672167.1-203ENST00000641299 2975 ntBASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 NEAT1-202ENST00000501122 22743 ntBASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 Y_RNA.222-201ENST00000364264 102 ntBASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 SYF2P2-201ENST00000417620 583 ntBASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 UBE2V1P4-201ENST00000425374 344 ntBASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 MRPL48P1-201ENST00000445390 636 ntBASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 AL591623.2-201ENST00000449978 222 ntBASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 RNU7-138P-201ENST00000459479 64 ntBASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 AC108860.1-201ENST00000484521 383 ntBASIC4.86□□□□□ -1.63
ATXN3LQ9H3M9 AC018437.1-201ENST00000492214 406 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms