Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 SNORD35A-201ENST00000363389 86 ntBASIC7.11□□□□□ -1.27
RNF39Q9H2S5 H3F3BP1-201ENST00000440551 403 ntBASIC7.11□□□□□ -1.27
RNF39Q9H2S5 AC093423.1-201ENST00000440817 142 ntBASIC7.11□□□□□ -1.27
RNF39Q9H2S5 RPL23AP56-201ENST00000460778 453 ntBASIC7.11□□□□□ -1.27
RNF39Q9H2S5 AC018797.1-201ENST00000510791 255 ntBASIC7.11□□□□□ -1.27
RNF39Q9H2S5 SCARNA15.2-201ENST00000516409 127 ntBASIC7.11□□□□□ -1.27
RNF39Q9H2S5 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 SNORD98-201ENST00000636377 67 ntBASIC7.11□□□□□ -1.27
RNF39Q9H2S5 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 AC004076.2-201ENST00000620532 3323 ntBASIC7.11□□□□□ -1.27
RNF39Q9H2S5 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.11□□□□□ -1.27
RNF39Q9H2S5 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 SNORA27.1-201ENST00000362604 124 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 RNA5-8SP4-201ENST00000365096 150 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 RNU6-679P-201ENST00000391003 106 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 RPL30P4-201ENST00000429309 333 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 AL354710.1-201ENST00000453641 246 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 SCARNA18B-201ENST00000458806 135 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 RNU1-131P-201ENST00000458943 161 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 RNU6-634P-201ENST00000459134 106 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 RN7SL807P-201ENST00000470923 297 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 RN7SL170P-201ENST00000487098 295 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 RPL12P30-201ENST00000488389 499 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 RN7SL208P-201ENST00000577964 296 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 RN7SL475P-201ENST00000583379 298 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 AC096720.1-201ENST00000604441 183 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 MIR376A2-201ENST00000636782 80 ntBASIC7.1□□□□□ -1.27
RNF39Q9H2S5 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF39Q9H2S5 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 SNORA7.5-201ENST00000410672 110 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 AC008753.1-201ENST00000423096 284 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 RN7SL552P-201ENST00000462094 276 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 GM2AP2-201ENST00000491764 562 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 RN7SL57P-201ENST00000493687 290 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 AC095057.1-201ENST00000507583 168 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 RNA5SP418-201ENST00000515951 117 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 RNU6-63P-201ENST00000516690 95 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 AC022790.1-201ENST00000522872 204 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 RN7SL230P-201ENST00000580835 303 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 uc_338.31-201ENST00000615595 186 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 MIR8089-201ENST00000620165 82 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 LINC02495-203ENST00000636704 242 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 MROH3P-201ENST00000435735 2676 ntBASIC7.09□□□□□ -1.27
RNF39Q9H2S5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF39Q9H2S5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
RNF39Q9H2S5 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
RNF39Q9H2S5 AL359922.2-201ENST00000581788 3017 ntBASIC7.09□□□□□ -1.28
RNF39Q9H2S5 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 U8.12-201ENST00000384701 133 ntBASIC7.08□□□□□ -1.28
RNF39Q9H2S5 RAB6C-AS1-202ENST00000433431 123 ntBASIC7.08□□□□□ -1.28
RNF39Q9H2S5 RN7SL132P-201ENST00000478131 296 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms