Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RN7SKP40-201ENST00000517211 242 ntBASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 RPL23AP53-201ENST00000521854 457 ntBASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 AC024940.3-201ENST00000538551 316 ntBASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 AC022968.1-201ENST00000567372 442 ntBASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 AC098826.3-201ENST00000603823 466 ntBASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 AC009314.1-201ENST00000603871 304 ntBASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 AC004852.3-201ENST00000614131 326 ntBASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 MIR6837-201ENST00000620884 64 ntBASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 SDAD1P2-201ENST00000441308 2028 ntBASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
BHLHE41Q9C0J9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-212P-201ENST00000362642 104 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-37P-201ENST00000362692 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-1167P-201ENST00000363227 94 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-173P-201ENST00000364215 104 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-11P-201ENST00000364234 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-7-201ENST00000364784 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-8-201ENST00000365467 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-25P-201ENST00000383873 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-1-201ENST00000383898 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-48P-201ENST00000384161 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-36P-201ENST00000384172 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-4P-201ENST00000384205 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-5P-201ENST00000384238 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-3P-201ENST00000384314 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-16P-201ENST00000384385 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-15P-201ENST00000384534 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-2-201ENST00000384627 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-29P-201ENST00000384637 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-9-201ENST00000384776 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-33P-201ENST00000384793 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 MIR937-201ENST00000401271 86 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 LAP3P1-201ENST00000403648 294 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AL096701.2-201ENST00000416920 238 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 TOMM20P4-201ENST00000427861 435 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RPL7L1P9-201ENST00000431298 745 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AL159987.2-201ENST00000432754 307 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RN7SL515P-201ENST00000463999 297 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RN7SL799P-201ENST00000475891 298 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 OR2AO1P-201ENST00000476497 403 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RN7SL591P-201ENST00000496150 292 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-911P-201ENST00000516523 104 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-6P-201ENST00000606623 107 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AC098479.1-201ENST00000609225 154 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AC099669.2-201ENST00000616549 437 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AC015914.2-201ENST00000618167 288 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 MTND5P9-201ENST00000503854 1755 ntBASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BHLHE41Q9C0J9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 AL731532.2-201ENST00000623542 1953 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-1025P-201ENST00000410629 104 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 EIF4EP2-201ENST00000422816 654 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 AL590664.1-201ENST00000448065 339 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 AL591623.2-201ENST00000449978 222 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 AL356981.1-201ENST00000454879 684 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 RPS4XP1-201ENST00000482189 787 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 AC025465.3-201ENST00000510570 311 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms