Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 MIR5009-201ENST00000578736 100 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC053481.4-201ENST00000583164 216 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC069307.1-201ENST00000602820 447 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AP000787.2-201ENST00000604432 568 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC006077.1-201ENST00000604746 343 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 IGLCOR22-2-201ENST00000605398 313 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR6748-201ENST00000610433 71 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR7155-201ENST00000615925 56 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RPL23AP61-201ENST00000623642 466 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC055839.1-201ENST00000634467 498 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 AL121950.1-201ENST00000624993 2077 ntBASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 AC009951.1-201ENST00000623674 2614 ntBASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 AL360270.2-201ENST00000562952 5985 ntBASIC1.84□□□□□ -2.12
KRTAP4-3Q9BYR4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 AC097461.1-201ENST00000568928 2821 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 AL034549.2-201ENST00000618285 3373 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 AC138393.1-203ENST00000327086 343 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RNA5SP507-201ENST00000363603 121 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-853P-201ENST00000364306 107 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-61P-201ENST00000365528 109 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-471P-201ENST00000383944 106 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU1-136P-201ENST00000384181 164 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-1201P-201ENST00000384227 107 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.570-201ENST00000384750 101 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 MIR9-2-201ENST00000384838 87 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 MIR15B-201ENST00000385045 98 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 MIR765-201ENST00000390226 114 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 AL645927.1-201ENST00000396783 406 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL23AP17-201ENST00000401064 499 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-383P-201ENST00000410864 94 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.625-201ENST00000411256 107 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 AL030996.1-201ENST00000411430 235 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 AC073264.1-201ENST00000411508 416 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 ELOCP19-201ENST00000411919 318 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL23AP27-201ENST00000415161 451 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 TBCAP2-201ENST00000416175 326 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RPS26P13-201ENST00000419030 330 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 AC108075.1-201ENST00000424692 529 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 TMEM183AP1-205ENST00000432739 290 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RPS15AP5-201ENST00000436276 388 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 AL354714.3-201ENST00000447284 493 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL23AP3-201ENST00000453844 468 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL23AP67-201ENST00000465341 474 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL7AP6-201ENST00000477943 801 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 RPS21P4-201ENST00000487122 248 ntBASIC1.83□□□□□ -2.12
KRTAP4-3Q9BYR4 ANXA2P1-201ENST00000505539 926 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms