Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RNU6-188P-201ENST00000364207 107 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 SMIM11P1-201ENST00000369586 178 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 MIR200C-201ENST00000384980 68 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-248P-201ENST00000410720 107 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 C1DP2-201ENST00000418167 426 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 MTCO2P34-201ENST00000421994 607 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 SNRPEP9-201ENST00000436794 238 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 CECR9-201ENST00000453421 199 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 RPL12P25-201ENST00000455592 494 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 MTND4P2-201ENST00000507767 1203 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AC117522.2-201ENST00000510049 657 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-677P-201ENST00000516914 101 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 NUTF2P8-201ENST00000604593 363 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AC004805.2-201ENST00000605382 482 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AL365204.3-201ENST00000612448 685 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AC010678.1-201ENST00000614118 713 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AC138932.5-201ENST00000617759 563 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AC022149.2-201ENST00000621061 203 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AC068647.1-201ENST00000489539 2265 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 API5P2-201ENST00000397055 1498 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-946P-201ENST00000383878 107 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-14P-201ENST00000384630 106 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 MIR23B-201ENST00000384832 97 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AL139397.2-201ENST00000404529 772 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 MTCO1P19-201ENST00000443487 500 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC093899.1-201ENST00000457984 376 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC233702.1-201ENST00000482905 502 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 HMGN1P11-201ENST00000508668 303 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 DUXAP2-201ENST00000519198 589 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC026333.2-201ENST00000542164 106 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 MIR3167-201ENST00000579623 85 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 RSL24D1P11-201ENST00000591045 491 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AL133393.1-201ENST00000603277 287 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC174048.1-201ENST00000603389 144 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC245014.2-201ENST00000603689 287 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 BNIP3P9-201ENST00000603714 553 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC064872.1-201ENST00000604823 1072 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC246785.4-201ENST00000605374 287 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 MIR98-201ENST00000606724 119 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC109347.2-201ENST00000610220 349 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AL121772.2-201ENST00000614331 297 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC072046.2-201ENST00000618366 268 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 AC103988.1-201ENST00000566382 2177 ntBASIC3.72□□□□□ -1.81
HERPUD2Q9BSE4 CR848007.1-201ENST00000442354 1699 ntBASIC3.71□□□□□ -1.81
HERPUD2Q9BSE4 AL390237.1-201ENST00000404226 1415 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 RNA5SP51-201ENST00000364750 119 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AP002088.1-201ENST00000382740 395 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 RNU6-39P-201ENST00000384344 107 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 U3.39-201ENST00000408569 239 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 BX295541.1-201ENST00000417774 250 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AL365338.1-201ENST00000422282 858 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AL451062.2-201ENST00000427515 271 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 HMGB3P8-201ENST00000449709 577 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms