Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 RNA5SP52-201ENST00000362448 134 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU1-85P-201ENST00000364127 164 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-1032P-201ENST00000384100 107 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 Y_RNA.473-201ENST00000384333 102 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AL356421.1-201ENST00000403255 413 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 RPL7P10-201ENST00000417407 739 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AC096632.1-201ENST00000427395 310 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AC096644.2-201ENST00000429278 159 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AC104308.1-201ENST00000454621 333 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AL162395.1-201ENST00000457882 422 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 RPS20P21-201ENST00000466859 343 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 OR4P1P-201ENST00000530808 1136 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 MTND6P33-201ENST00000571794 183 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 RN7SL600P-201ENST00000581811 299 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 MIR4424-201ENST00000585257 86 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AC005357.1-201ENST00000588399 301 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AC115085.1-201ENST00000588924 229 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 AC018889.1-201ENST00000605372 397 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 MIR7154-201ENST00000620673 73 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 MTND5P30-201ENST00000452896 1731 ntBASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AC116667.1-201ENST00000604855 2072 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AC134882.1-201ENST00000603738 1676 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 RNA5SP502-201ENST00000362694 119 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 Y_RNA.153-201ENST00000363615 91 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU1-13P-201ENST00000384499 162 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR93-201ENST00000385024 80 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AL356095.1-201ENST00000417217 199 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 RPL36P19-201ENST00000430744 301 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 FABP5P14-201ENST00000437273 393 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 RPL29P14-201ENST00000495837 428 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AP002404.1-201ENST00000532005 451 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AP000763.2-201ENST00000540641 163 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AC124068.1-201ENST00000563131 678 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR3672-201ENST00000584290 82 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AL022099.1-201ENST00000604551 712 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AL031666.3-201ENST00000609320 1006 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AC078938.1-201ENST00000620993 318 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AL159972.1-201ENST00000625150 448 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 CDRT1-208ENST00000630868 794 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 AC244517.1-201ENST00000606030 2086 ntBASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDK5RAP1Q96SZ6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC097504.1-201ENST00000515103 2415 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 Y_RNA.176-201ENST00000363815 109 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 RNY3P13-201ENST00000365542 102 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-1029P-201ENST00000384109 107 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 Y_RNA.530-201ENST00000384587 101 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 Y_RNA.574-201ENST00000384766 95 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 RNA5SP104-201ENST00000410989 118 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC008280.1-201ENST00000418851 412 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC018865.2-201ENST00000423631 129 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC008267.5-201ENST00000424928 265 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 HMGB1P12-201ENST00000438594 598 ntBASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.32□□□□□ -1.72
CDK5RAP1Q96SZ6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms