Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNTNAP3BQ96NU0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CNTNAP3BQ96NU0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 MIR133B-201ENST00000362210 119 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 RNU4-84P-201ENST00000364200 139 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 Y_RNA.286-201ENST00000364813 102 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 Y_RNA.331-201ENST00000365267 102 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 RNU6-701P-201ENST00000384059 107 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 Y_RNA.623-201ENST00000411128 95 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 AC092809.3-201ENST00000415453 231 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 OOSP1P1-201ENST00000423265 274 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 AL160275.3-201ENST00000423876 471 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 RNU6-677P-201ENST00000516914 101 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 MIR2355-201ENST00000517199 87 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 HMGB1P40-201ENST00000525121 540 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 BRDTP1-201ENST00000605735 677 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 AC037487.3-201ENST00000606668 112 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 uc_338.26-201ENST00000612659 160 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 AL591926.4-201ENST00000616895 298 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 AC034229.5-201ENST00000624258 185 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 AP001541.1-201ENST00000623322 1904 ntBASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CNTNAP3BQ96NU0 AC133552.1-201ENST00000569988 4007 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 RNU6-429P-201ENST00000384582 108 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 RNU6-146P-201ENST00000384602 108 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 MIR190B-201ENST00000401119 79 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 RN7SKP151-201ENST00000410230 316 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 RNA5SP44-201ENST00000410446 133 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 AL391219.1-201ENST00000422570 483 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 REREP1Y-201ENST00000422655 198 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 RPS26P47-201ENST00000427219 348 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 REREP2Y-201ENST00000439103 200 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 RPS11P1-201ENST00000451072 473 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 AC010631.1-201ENST00000474150 156 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 AC020593.1-201ENST00000507399 299 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 IGKV2D-36-201ENST00000518643 226 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 AC022790.1-201ENST00000522872 204 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 AC021006.3-201ENST00000530771 192 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 MIR4716-201ENST00000579628 84 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 MIR4659A-201ENST00000580269 81 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 BDH2P1-201ENST00000602288 736 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 AL034351.1-201ENST00000605288 668 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 SNORD113-5-201ENST00000607261 78 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 AC039056.2-201ENST00000622261 511 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 AC008873.1-201ENST00000625051 138 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 AC125336.1-201ENST00000508893 2827 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 AC008568.2-201ENST00000623862 2313 ntBASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3BQ96NU0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 AL031595.2-201ENST00000624215 19071 ntBASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 AL672167.1-205ENST00000641112 3080 ntBASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 RNU6-755P-201ENST00000364400 103 ntBASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 RNU6-1289P-201ENST00000384431 106 ntBASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 AL590704.1-201ENST00000402856 794 ntBASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 AC015977.1-201ENST00000418887 292 ntBASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 RPS15AP6-201ENST00000420703 385 ntBASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 CYCSP43-201ENST00000438233 310 ntBASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.24□□□□□ -1.57
CNTNAP3BQ96NU0 RPL21P41-201ENST00000459863 264 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms