Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LINC00477Q96M19 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LINC00477Q96M19 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LINC00477Q96M19 AC092593.1-201ENST00000515413 1815 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 FAM35BP-202ENST00000497389 3337 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 PABPC1P9-201ENST00000426076 1612 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LINC00477Q96M19 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 RNA5SP393-201ENST00000363423 117 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 RNU1-105P-201ENST00000363470 161 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 RNU6-553P-201ENST00000364047 96 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 RNU6-853P-201ENST00000364306 107 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 RNU1-39P-201ENST00000383897 165 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 Y_RNA.560-201ENST00000384689 102 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 MIR181B1-201ENST00000385240 110 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 SNORA48.7-201ENST00000391302 135 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC078974.1-201ENST00000411597 223 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 MTCO2P5-201ENST00000422621 426 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AL671855.1-201ENST00000446875 1203 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 RPS27AP8-201ENST00000452665 445 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC072039.1-201ENST00000477611 581 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 RPS27AP9-201ENST00000477681 438 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AL358832.1-201ENST00000497800 389 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC005178.1-201ENST00000508392 440 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 SNORA3.4-201ENST00000515969 96 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 SCARNA13-201ENST00000516672 275 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LINC00477Q96M19 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC009163.5-201ENST00000575421 637 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 MIR3915-201ENST00000578518 97 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC103810.1-201ENST00000579873 453 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 ZNF861P-201ENST00000588126 639 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC008277.2-201ENST00000605196 797 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC080013.4-201ENST00000607624 649 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AP002826.1-201ENST00000608835 315 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC069200.1-201ENST00000609511 323 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 MIR6798-201ENST00000612887 67 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC002550.2-201ENST00000621246 394 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC027309.3-201ENST00000623419 351 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC079248.2-201ENST00000623779 326 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AC009812.4-201ENST00000569134 1805 ntBASIC2.11□□□□□ -2.07
LINC00477Q96M19 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC00477Q96M19 AL359693.1-201ENST00000614959 2407 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 SDAD1P2-201ENST00000441308 2028 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 TPTE2P4-201ENST00000258589 1605 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 AL356473.1-201ENST00000406203 1408 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LINC00477Q96M19 MTND5P33-201ENST00000571250 1450 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 RNU6-462P-201ENST00000362659 105 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 RNU5E-8P-201ENST00000363502 116 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 SET-203ENST00000372688 801 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 RNU1-138P-201ENST00000384093 164 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 MIR34B-201ENST00000385076 84 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 AL356421.1-201ENST00000403255 413 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 MTCYBP36-201ENST00000404146 440 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 RN7SKP27-201ENST00000410684 333 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 TPMTP3-201ENST00000411928 735 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC080125.1-201ENST00000414888 684 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 RPL7P37-201ENST00000425095 738 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 NIPA2P5-201ENST00000452282 464 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 SNORD121B-201ENST00000458838 81 ntBASIC2.1□□□□□ -2.07
LINC00477Q96M19 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00477Q96M19 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms