Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 RNU6-1314P-201ENST00000517139 104 ntBASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 GLUD1P4-201ENST00000590914 418 ntBASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 AC083809.1-201ENST00000615051 472 ntBASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 uc_338.12-201ENST00000616344 181 ntBASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 AC002550.2-201ENST00000621246 394 ntBASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM2Q96JY6 AP000756.2-201ENST00000624168 2567 ntBASIC4.03□□□□□ -1.77
PDLIM2Q96JY6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
PDLIM2Q96JY6 AC007823.1-201ENST00000569932 1566 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 ASNSP3-201ENST00000451989 1306 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC009902.3-201ENST00000606235 2172 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 Y_RNA.138-201ENST00000363462 102 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 RNU5E-8P-201ENST00000363502 116 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 Y_RNA.384-201ENST00000383909 102 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 RAB28P1-201ENST00000411517 641 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC004987.3-201ENST00000413879 771 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 NCOR1P3-201ENST00000420479 303 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AL353729.1-201ENST00000425044 720 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 OR4K11P-201ENST00000431829 904 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC024082.2-201ENST00000434771 238 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC105402.2-201ENST00000438503 358 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 NIPA2P5-201ENST00000452282 464 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 MRPS17P3-201ENST00000465453 385 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AL049714.1-201ENST00000466686 347 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 UQCRHP4-201ENST00000471686 272 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 HSPD1P15-201ENST00000505573 1122 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 RNU4-49P-201ENST00000516080 140 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC093331.1-201ENST00000521474 169 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 OR4P1P-201ENST00000530808 1136 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 BNIP3P6-201ENST00000549284 499 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 SCOCP1-201ENST00000554676 349 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 RPL21P12-201ENST00000559810 515 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 OR4K8P-201ENST00000578842 1048 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 MIR4742-201ENST00000581069 85 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 RN7SL600P-201ENST00000581811 299 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 MIR3939-201ENST00000582614 106 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC011477.5-201ENST00000586571 259 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AP001029.3-201ENST00000588063 596 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 BNIP3P22-201ENST00000593399 556 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC010591.1-201ENST00000603941 649 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AL162730.1-201ENST00000605734 292 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC104237.2-201ENST00000612456 443 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC123768.4-201ENST00000616244 701 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 MIR6864-201ENST00000617935 70 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AL603758.1-201ENST00000618654 241 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC068831.8-201ENST00000620171 435 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 C2orf27A-204ENST00000623058 969 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 MIR6830-201ENST00000636015 70 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 USP8P1-201ENST00000494673 3183 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 AC090229.1-201ENST00000590983 1609 ntBASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM2Q96JY6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 AL118496.1-201ENST00000440201 1812 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 MIR383-201ENST00000362257 73 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 SNORD56.3-201ENST00000363507 71 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 Y_RNA.184-201ENST00000363884 108 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 RNU4-48P-201ENST00000365559 182 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 RNU6-39P-201ENST00000384344 107 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 AL356967.1-201ENST00000406305 431 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 Y_RNA.615-201ENST00000410769 117 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 RNU2-62P-201ENST00000410868 191 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 NDUFB4P5-201ENST00000415445 361 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 AC245291.1-201ENST00000419501 328 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 OR4F13P-201ENST00000428478 931 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 HMGB1P18-201ENST00000438801 619 ntBASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM2Q96JY6 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms