Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPRUQ92729 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.16□□□□□ -1.9
PTPRUQ92729 HMGB3P15-201ENST00000507326 574 ntBASIC3.16□□□□□ -1.9
PTPRUQ92729 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPRUQ92729 DEFB131D-201ENST00000526803 184 ntBASIC3.16□□□□□ -1.9
PTPRUQ92729 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPRUQ92729 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPRUQ92729 MTND4P33-201ENST00000556706 766 ntBASIC3.16□□□□□ -1.9
PTPRUQ92729 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPRUQ92729 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPRUQ92729 AC027449.1-201ENST00000608890 407 ntBASIC3.16□□□□□ -1.9
PTPRUQ92729 MIR6766-201ENST00000622641 72 ntBASIC3.16□□□□□ -1.9
PTPRUQ92729 AC095031.1-201ENST00000623685 672 ntBASIC3.16□□□□□ -1.9
PTPRUQ92729 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRUQ92729 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRUQ92729 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.15□□□□□ -1.9
PTPRUQ92729 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.15□□□□□ -1.9
PTPRUQ92729 ZNF355P-201ENST00000427301 3216 ntBASIC3.15□□□□□ -1.9
PTPRUQ92729 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPRUQ92729 AC091152.2-201ENST00000591628 2569 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTPRUQ92729 RNU6-1242P-201ENST00000391052 103 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 HMGB1P17-201ENST00000403495 628 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 MIR1284-201ENST00000408337 120 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 TPMTP2-201ENST00000414372 726 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPRUQ92729 AL139421.1-201ENST00000423010 169 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPRUQ92729 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPRUQ92729 AC124916.1-201ENST00000444020 547 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.15□□□□□ -1.91
PTPRUQ92729 AL606517.1-201ENST00000446914 387 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 AL353691.1-201ENST00000451332 387 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 Z82190.1-201ENST00000454534 490 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 AC096751.1-202ENST00000502691 1067 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPRUQ92729 RNU6-415P-201ENST00000516252 97 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPRUQ92729 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPRUQ92729 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPRUQ92729 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPRUQ92729 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPRUQ92729 AC106028.5-201ENST00000610332 395 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 AL360181.4-201ENST00000621752 134 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 MIR6733-201ENST00000635723 61 ntBASIC3.15□□□□□ -1.91
PTPRUQ92729 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTPRUQ92729 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPRUQ92729 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPRUQ92729 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PTPRUQ92729 MIR21-201ENST00000362134 72 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PTPRUQ92729 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPRUQ92729 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.14□□□□□ -1.91
PTPRUQ92729 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPRUQ92729 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPRUQ92729 CR769776.1-201ENST00000441254 787 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 MTND3P1-201ENST00000441336 220 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 AC007677.1-201ENST00000445757 515 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.14□□□□□ -1.91
PTPRUQ92729 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.14□□□□□ -1.91
PTPRUQ92729 TRGVB-201ENST00000453257 471 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 HMGN2P16-201ENST00000456802 261 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.14□□□□□ -1.91
PTPRUQ92729 SCARNA17.1-201ENST00000516211 143 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 RNY4P37-201ENST00000516225 96 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 SCARNA17.2-201ENST00000516334 143 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 AP001804.3-201ENST00000525146 880 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPRUQ92729 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPRUQ92729 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPRUQ92729 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.14□□□□□ -1.91
PTPRUQ92729 AP001004.1-201ENST00000582468 324 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPRUQ92729 AL022099.1-201ENST00000604551 712 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.14□□□□□ -1.91
PTPRUQ92729 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.14□□□□□ -1.91
PTPRUQ92729 AC103710.1-201ENST00000610003 901 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 SCARNA17.4-201ENST00000614296 143 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 AC084035.1-201ENST00000634543 607 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 AC006927.4-201ENST00000639187 543 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPRUQ92729 MTND5P29-201ENST00000458676 1807 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 WWP1P1-201ENST00000466609 2769 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 AP001148.1-201ENST00000624124 2359 ntBASIC3.14□□□□□ -1.91
PTPRUQ92729 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
PTPRUQ92729 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPRUQ92729 DHFRP6-201ENST00000401776 268 ntBASIC3.13□□□□□ -1.91
PTPRUQ92729 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPRUQ92729 AL390023.1-201ENST00000428836 262 ntBASIC3.13□□□□□ -1.91
PTPRUQ92729 EZH2P1-201ENST00000431167 291 ntBASIC3.13□□□□□ -1.91
PTPRUQ92729 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPRUQ92729 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPRUQ92729 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.13□□□□□ -1.91
PTPRUQ92729 snoU13.8-201ENST00000458890 104 ntBASIC3.13□□□□□ -1.91
PTPRUQ92729 AC091179.1-201ENST00000461606 579 ntBASIC3.13□□□□□ -1.91
PTPRUQ92729 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPRUQ92729 AC093281.2-201ENST00000510153 597 ntBASIC3.13□□□□□ -1.91
PTPRUQ92729 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms