Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AP001029.3-201ENST00000588063 596 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL670379.6-201ENST00000603753 252 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC025449.1-201ENST00000603896 529 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL670379.11-201ENST00000604059 253 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC008162.1-201ENST00000604718 254 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL670379.1-201ENST00000604752 252 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL137849.1-201ENST00000604767 169 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 Z84480.1-201ENST00000605131 311 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL670379.5-201ENST00000605253 252 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL670379.12-201ENST00000605291 253 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL670379.8-201ENST00000605353 252 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL670379.7-201ENST00000605823 252 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL121992.2-201ENST00000606262 256 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AP002826.1-201ENST00000608835 315 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AP000553.6-201ENST00000641242 118 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 GABPAP-201ENST00000419271 1356 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 OR4G2P-202ENST00000641004 1759 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RNU6-50P-201ENST00000362356 103 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RNU6-188P-201ENST00000364207 107 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RPS4XP8-201ENST00000402039 771 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RNA5SP129-201ENST00000410276 118 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RNU2-39P-201ENST00000410604 198 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RN7SKP140-201ENST00000411196 284 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 Z92545.1-201ENST00000411782 234 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AL451054.2-201ENST00000420896 202 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 EIF1P1-201ENST00000421436 341 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AL353193.1-201ENST00000421444 268 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RPL7L1P10-201ENST00000427790 463 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 CYCSP4-201ENST00000429682 331 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AC022364.2-201ENST00000457963 554 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AC013267.1-201ENST00000458227 267 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RPS20P20-201ENST00000460498 340 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RPL21P104-201ENST00000464143 478 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RN7SL601P-201ENST00000471221 293 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AC009646.1-201ENST00000510455 318 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AC011352.1-201ENST00000512300 793 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 SCARNA13-201ENST00000516672 275 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RPS3AP4-201ENST00000555161 764 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AC090877.1-201ENST00000561418 344 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 uc_338.32-201ENST00000615087 172 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AL137003.2-201ENST00000606924 2538 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 AL133383.2-201ENST00000622958 2336 ntBASIC3.69□□□□□ -1.82
HMGB4Q8WW32 RNU6-1120P-201ENST00000362988 108 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 Y_RNA.367-201ENST00000365544 101 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 SMIM11P1-201ENST00000369586 178 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 DEFB109C-201ENST00000382575 264 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 DEFB109B-201ENST00000382656 264 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 Y_RNA.409-201ENST00000383990 98 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 ZNF90P2-204ENST00000419323 1075 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AC245054.1-201ENST00000420944 258 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 RPL27AP8-201ENST00000424277 446 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AC093106.2-201ENST00000428212 385 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 CYCSP32-201ENST00000440548 321 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 RPL23AP20-201ENST00000447965 421 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 SNORD27.1-201ENST00000516319 72 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 SCARNA15.2-201ENST00000516409 127 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 RN7SKP258-201ENST00000517151 304 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 MTND4LP26-201ENST00000518144 282 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AP006587.4-201ENST00000526053 529 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AC055876.1-202ENST00000567053 138 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AC012507.3-201ENST00000603556 477 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AC106900.2-201ENST00000604994 317 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 MIR8058-201ENST00000615737 89 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 U6atac.1-201ENST00000616025 117 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AL355365.1-201ENST00000616480 294 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AC103858.2-201ENST00000621471 543 ntBASIC3.68□□□□□ -1.82
HMGB4Q8WW32 AC139792.3-201ENST00000623525 224 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms