Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AL663074.2-201ENST00000440621 479 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AZGP1P2-201ENST00000454506 345 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AC012158.1-204ENST00000483430 465 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AC007686.1-201ENST00000488511 463 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 RN7SL447P-201ENST00000494711 245 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 SNORA40.9-201ENST00000515895 93 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AC024940.3-201ENST00000538551 316 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 HMGB1P14-201ENST00000557424 591 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AP002799.1-201ENST00000623552 423 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AC090617.7-201ENST00000623952 126 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AC083837.1-201ENST00000565297 2994 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AC110491.1-201ENST00000562191 2010 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 NCAPGP1-201ENST00000505112 1814 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 MTND5P32-201ENST00000560711 1802 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 RNU6-147P-201ENST00000383983 107 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 Y_RNA.420-201ENST00000384043 110 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 RNU6-17P-201ENST00000384245 107 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 RNU1-106P-201ENST00000384382 164 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 RNU6-18P-201ENST00000384527 107 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 RNU6-476P-201ENST00000384726 107 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 CYB5AP4-201ENST00000396692 399 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 AL133388.1-201ENST00000404509 287 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 RNA5SP89-201ENST00000410300 108 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 AL358472.1-201ENST00000431295 329 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 RPS5P7-201ENST00000456664 608 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 RNU1-88P-201ENST00000459274 128 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 RAC1P5-201ENST00000512182 576 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 HIGD1AP3-201ENST00000515857 278 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 RNU6-567P-201ENST00000516746 107 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 AL161629.2-201ENST00000615347 275 ntBASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SNIP1Q8TAD8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 THAP12P9-201ENST00000503971 2360 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 RNU6-428P-201ENST00000362942 107 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 RNA5SP30-201ENST00000365552 115 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 SNORA22-201ENST00000383907 134 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 RNU6-76P-201ENST00000384060 104 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 AL592148.1-201ENST00000413568 445 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 AL391219.1-201ENST00000422570 483 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 AC009296.1-201ENST00000443146 155 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 AC090804.1-201ENST00000448870 490 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 AC074290.1-201ENST00000448883 135 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 ACA64.4-201ENST00000459070 127 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 APOOP4-201ENST00000513530 597 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 RNU6-1315P-201ENST00000517187 99 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 RNU6-840P-201ENST00000517275 65 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 AC115990.1-201ENST00000526957 301 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 AL358913.1-201ENST00000554342 121 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 AC012616.1-201ENST00000600294 197 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 SMG1P7-201ENST00000565246 2704 ntBASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms