Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC026414.1-201ENST00000504046 698 ntBASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 AC234781.5-201ENST00000508429 271 ntBASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 RNU4-29P-201ENST00000515943 174 ntBASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 snoZ278.1-201ENST00000517059 112 ntBASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 AC087241.2-201ENST00000535801 324 ntBASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 SNRPGP1-201ENST00000553864 222 ntBASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 AC103810.6-201ENST00000606708 136 ntBASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 MKKS-204ENST00000639674 192 ntBASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.22□□□□□ -2.05
CLHC1Q8NHS4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 RNU6-741P-201ENST00000383889 107 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 EIF4EP4-201ENST00000424916 578 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 MTATP6P11-201ENST00000428071 670 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC092634.2-201ENST00000428146 1010 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 ATP5F1P1-201ENST00000433775 569 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 RPS15AP5-201ENST00000436276 388 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 PSPHP1-201ENST00000450062 261 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC128713.1-201ENST00000471495 306 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 MTCO2P9-201ENST00000503214 694 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 CYCSP26-201ENST00000534107 320 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 SNORD53-201ENST00000579969 78 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC006023.1-201ENST00000603944 259 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC004853.1-201ENST00000604902 698 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AL161423.1-201ENST00000613700 262 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AL596245.1-201ENST00000618994 362 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 MIR6130-201ENST00000619419 109 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AP003485.2-201ENST00000623636 610 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 AC073592.7-201ENST00000623659 507 ntBASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLHC1Q8NHS4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 RNU6-1083P-201ENST00000384022 107 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 CYCSP48-201ENST00000417124 323 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC009963.1-201ENST00000417265 157 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 GPM6BP3-201ENST00000442797 145 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 RPS15AP17-201ENST00000470598 390 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC126389.1-201ENST00000477436 290 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC090453.1-201ENST00000495560 436 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC118465.1-201ENST00000513820 1271 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 RNU7-193P-201ENST00000516723 65 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC105137.2-201ENST00000569073 466 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC068313.1-201ENST00000604028 1008 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC004067.1-201ENST00000608733 700 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 AC078880.5-201ENST00000617845 421 ntBASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLHC1Q8NHS4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 RNU6-216P-201ENST00000363282 104 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 UBE2V1P2-201ENST00000397758 440 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 RNU2-49P-201ENST00000410666 184 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 RN7SKP140-201ENST00000411196 284 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 RPL39P6-201ENST00000448289 150 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 AC072039.1-201ENST00000477611 581 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 AC010486.1-201ENST00000511793 424 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 RNA5SP291-201ENST00000517222 105 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 AC010186.2-204ENST00000537668 439 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 MIR4637-201ENST00000582405 84 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 AC087821.2-201ENST00000637086 450 ntBASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.19□□□□□ -2.06
CLHC1Q8NHS4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms