Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 RPS15AP7-201ENST00000439294 405 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 UBBP3-201ENST00000445497 241 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 Z99127.3-201ENST00000448158 395 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC097262.1-201ENST00000452559 548 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC107626.1-201ENST00000471084 183 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 RN7SL459P-201ENST00000481078 302 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC109486.1-201ENST00000486833 374 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 NDUFB4P2-201ENST00000509515 391 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 Y_RNA.717-201ENST00000517106 92 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC104027.1-201ENST00000521887 300 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC022878.1-201ENST00000530684 149 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 HSPE1P20-201ENST00000538133 289 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 H3F3AP1-201ENST00000559984 334 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 MIR5697-201ENST00000578045 78 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 MIR4286-201ENST00000580651 93 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 MIR3118-1-201ENST00000581787 76 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 BNIP3P9-201ENST00000603714 553 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC008745.1-201ENST00000604064 271 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC007619.2-201ENST00000605743 379 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AL391813.2-201ENST00000609113 322 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC012360.2-201ENST00000609349 391 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC063944.3-201ENST00000609969 533 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AL355816.2-201ENST00000610049 647 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC087683.2-201ENST00000611384 326 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC011939.3-201ENST00000613686 466 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC122133.1-201ENST00000613964 233 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC140725.3-201ENST00000616193 880 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC006338.2-201ENST00000616864 791 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 SNORD39.4-201ENST00000620099 78 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AL356863.1-201ENST00000623378 1080 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AC068057.2-201ENST00000624047 895 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 MIR3199-2-201ENST00000636243 86 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 MTND5P42-201ENST00000637720 498 ntBASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
LINC01561Q8N1V8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 SPRR2C-201ENST00000290702 219 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AL121657.1-201ENST00000327215 531 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RNU5F-7P-201ENST00000363696 115 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RNU6-512P-201ENST00000364438 103 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RNY4P16-201ENST00000364768 94 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RNU5E-5P-201ENST00000365379 116 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RNU6-1083P-201ENST00000384022 107 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RNU1-13P-201ENST00000384499 162 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RPL32P23-201ENST00000397237 405 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RPL7P60-201ENST00000397636 735 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AL049545.1-201ENST00000401856 572 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RPL26P29-201ENST00000415623 438 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AL356968.1-201ENST00000416622 474 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AC005005.2-201ENST00000420779 380 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AC005300.1-201ENST00000428401 373 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AC092427.1-202ENST00000430569 476 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AL591704.1-201ENST00000432574 275 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 SETP8-201ENST00000435341 628 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AC092641.1-201ENST00000440229 772 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 NANOGNBP1-201ENST00000448444 480 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 ZNF114P1-201ENST00000453500 292 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RPS29P20-201ENST00000489592 171 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AC105252.1-201ENST00000503089 286 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RNU5F-8P-201ENST00000515941 111 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RNU7-51P-201ENST00000516560 62 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RNU6-677P-201ENST00000516914 101 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 SNORA31.18-201ENST00000517043 134 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 RN7SKP40-201ENST00000517211 242 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 ARL2BPP2-201ENST00000550907 489 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AC007151.1-201ENST00000572774 483 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 NRBF2P5-201ENST00000603087 788 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AC007363.1-201ENST00000604736 620 ntBASIC2.32□□□□□ -2.04
LINC01561Q8N1V8 AP000860.1-201ENST00000605250 559 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms