Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AL672167.1-205ENST00000641112 3080 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 RNU6-1167P-201ENST00000363227 94 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 RNU4-9P-201ENST00000364951 139 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 RNA5SP131-201ENST00000365452 119 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 RNU6-318P-201ENST00000384283 103 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 Y_RNA.488-201ENST00000384403 102 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AL662874.1-201ENST00000426065 230 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 GEMIN8P3-201ENST00000445417 720 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 SNORD2.1-201ENST00000458762 69 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AC104164.2-201ENST00000496953 495 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 HMGB3P16-201ENST00000508037 287 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AC006427.1-201ENST00000514359 712 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 SNORA27.4-201ENST00000516650 95 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AK6P2-201ENST00000549020 471 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 IGBP1P1-201ENST00000554337 1009 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AL161798.1-201ENST00000604630 131 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AL049539.1-201ENST00000611964 459 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AC018445.2-201ENST00000622987 260 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 FAM91A3P-201ENST00000456826 2544 ntBASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC116Q8IYX3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 RNA5SP453-201ENST00000362503 119 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 RN7SKP185-201ENST00000362813 326 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 RNU6-879P-201ENST00000364328 108 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 RNU6-658P-201ENST00000384606 106 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 Y_RNA.586-201ENST00000391146 98 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 AC079809.1-201ENST00000415468 276 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 RPS26P47-201ENST00000427219 348 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 MTATP6P4-201ENST00000427725 675 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 RPL7L1P9-201ENST00000431298 745 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 AC099670.2-201ENST00000435130 321 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 RPS15AP7-201ENST00000439294 405 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 SNORD46.2-201ENST00000516021 102 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 MIR4423-201ENST00000580922 80 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 AC084757.4-201ENST00000616350 526 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 LINC01109-201ENST00000603837 3081 ntBASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CCDC116Q8IYX3 SAGE2P-201ENST00000420011 2126 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 RNA5SP510-201ENST00000364697 99 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 RNA5SP223-201ENST00000365174 120 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 Y_RNA.400-201ENST00000383963 111 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 RNU6-843P-201ENST00000384454 104 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 MIR10A-201ENST00000385043 110 ntBASIC5.24□□□□□ -1.57
CCDC116Q8IYX3 RPS4XP3-201ENST00000398541 413 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms