Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP48Q86UV5 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
USP48Q86UV5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.16□□□□□ -1.58
USP48Q86UV5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USP48Q86UV5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
USP48Q86UV5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP48Q86UV5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
USP48Q86UV5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
USP48Q86UV5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USP48Q86UV5 Y_RNA.138-201ENST00000363462 102 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 RNU6-522P-201ENST00000364497 107 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 Y_RNA.373-201ENST00000365600 103 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USP48Q86UV5 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.15□□□□□ -1.59
USP48Q86UV5 RPS20P14-201ENST00000412545 360 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 RPL30P2-201ENST00000414021 291 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.15□□□□□ -1.59
USP48Q86UV5 AC244098.2-201ENST00000422068 99 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.15□□□□□ -1.59
USP48Q86UV5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.15□□□□□ -1.59
USP48Q86UV5 RPL21P8-201ENST00000465083 535 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USP48Q86UV5 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.15□□□□□ -1.59
USP48Q86UV5 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.15□□□□□ -1.59
USP48Q86UV5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.15□□□□□ -1.59
USP48Q86UV5 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.15□□□□□ -1.59
USP48Q86UV5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.15□□□□□ -1.59
USP48Q86UV5 RPL23AP97-201ENST00000568955 471 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 AL355375.2-201ENST00000574825 175 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.15□□□□□ -1.59
USP48Q86UV5 MIR5685-201ENST00000579080 79 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.15□□□□□ -1.59
USP48Q86UV5 AC007687.1-201ENST00000602704 304 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 AC015967.1-201ENST00000619893 476 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 AL357559.1-201ENST00000622228 274 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.15□□□□□ -1.59
USP48Q86UV5 AC016588.2-201ENST00000632484 3021 ntBASIC5.15□□□□□ -1.59
USP48Q86UV5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
USP48Q86UV5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.14□□□□□ -1.59
USP48Q86UV5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
USP48Q86UV5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP48Q86UV5 RNU6-550P-201ENST00000391057 101 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 FABP5P13-201ENST00000452144 328 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 snoU13.24-201ENST00000458998 104 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 RNU6-329P-201ENST00000459618 107 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 AC010469.1-201ENST00000463864 576 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 AC096576.1-201ENST00000489014 359 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.14□□□□□ -1.59
USP48Q86UV5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.14□□□□□ -1.59
USP48Q86UV5 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.14□□□□□ -1.59
USP48Q86UV5 ERHP1-201ENST00000523006 310 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 AC008489.1-201ENST00000524271 483 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 AP004371.1-201ENST00000525240 214 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
USP48Q86UV5 AC109635.4-202ENST00000531666 412 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 CYP4A43P-201ENST00000568156 121 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 AC008521.1-201ENST00000587471 187 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 AC021646.1-201ENST00000605469 484 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 Z98200.1-201ENST00000607298 470 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 FAM27D1-201ENST00000612308 341 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 AC012409.4-201ENST00000612923 249 ntBASIC5.14□□□□□ -1.59
USP48Q86UV5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.14□□□□□ -1.59
USP48Q86UV5 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.14□□□□□ -1.59
USP48Q86UV5 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.14□□□□□ -1.59
USP48Q86UV5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
USP48Q86UV5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP48Q86UV5 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP48Q86UV5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP48Q86UV5 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.13□□□□□ -1.59
USP48Q86UV5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
USP48Q86UV5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
USP48Q86UV5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.13□□□□□ -1.59
USP48Q86UV5 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.13□□□□□ -1.59
USP48Q86UV5 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USP48Q86UV5 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USP48Q86UV5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USP48Q86UV5 RNA5SP124-201ENST00000362739 110 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 Y_RNA.132-201ENST00000363421 102 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 RNA5SP175-201ENST00000364275 119 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 SNORA73.2-201ENST00000364946 201 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 U3.15-201ENST00000365398 212 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 Y_RNA.530-201ENST00000384587 101 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 AL590704.1-201ENST00000402856 794 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.13□□□□□ -1.59
USP48Q86UV5 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 NDUFB4P5-201ENST00000415445 361 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 HSPE1P1-201ENST00000421494 318 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 NDUFA5P4-201ENST00000436704 385 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 NEFMP1-201ENST00000443423 1006 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 RPL35AP15-201ENST00000468042 339 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 VN1R104P-201ENST00000505115 1009 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 FAM206BP-201ENST00000510179 541 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.13□□□□□ -1.59
USP48Q86UV5 TTC39CP1-201ENST00000512513 755 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 SNORA19.2-201ENST00000516013 114 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 RNU6-352P-201ENST00000516908 107 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 RNU6-685P-201ENST00000517088 95 ntBASIC5.13□□□□□ -1.59
USP48Q86UV5 SNORA31.22-201ENST00000517204 135 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms