Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 Y_RNA.668-201ENST00000516233 93 ntBASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 AP005902.1-201ENST00000521358 186 ntBASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 AC104576.1-201ENST00000524225 88 ntBASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 AC069240.1-201ENST00000548774 375 ntBASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 AC126177.3-201ENST00000551839 688 ntBASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 RPL7P50-201ENST00000600588 727 ntBASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 AC107871.2-201ENST00000612894 502 ntBASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 SDR42E1P2-201ENST00000614861 481 ntBASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 AL606534.2-204ENST00000635008 178 ntBASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 AC027228.2-201ENST00000567141 2154 ntBASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF111Q6ZNA4 NEAT1-202ENST00000501122 22743 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC016588.2-201ENST00000632484 3021 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RNU6-1249P-201ENST00000363237 111 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RNU6-178P-201ENST00000384631 104 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 SNORA41-201ENST00000384675 132 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RNU2-43P-201ENST00000410306 190 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RNU6-712P-201ENST00000410558 100 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC016769.2-201ENST00000414815 475 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RPL21P90-201ENST00000415692 466 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AL590762.4-201ENST00000425885 253 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 HSFY6P-201ENST00000445573 403 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 OR1H1P-201ENST00000448731 937 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC002553.2-201ENST00000453217 340 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AURKAPS2-201ENST00000454983 333 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RNU6-953P-201ENST00000459154 107 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RNU7-138P-201ENST00000459479 64 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RPL21P41-201ENST00000459863 264 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RPL9P32-201ENST00000464118 620 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RN7SL41P-201ENST00000476144 297 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RPS27AP13-201ENST00000498403 237 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC105758.1-201ENST00000506038 399 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 RNU6-840P-201ENST00000517275 65 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 ERHP1-201ENST00000523006 310 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC008489.1-201ENST00000524271 483 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC109446.1-201ENST00000566172 220 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC005357.1-201ENST00000588399 301 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC067852.4-201ENST00000590314 478 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AL121932.1-201ENST00000605542 214 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 AC062037.2-201ENST00000610137 73 ntBASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF111Q6ZNA4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 Y_RNA.314-201ENST00000365114 102 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 BX842559.1-201ENST00000419615 532 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 UBE2V1P4-201ENST00000425374 344 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AL158071.1-201ENST00000430315 461 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AL645568.3-201ENST00000433683 316 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 RPS17P8-201ENST00000434525 335 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AC099799.1-201ENST00000439809 192 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 RPL21P2-201ENST00000440049 481 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AC008264.1-201ENST00000447612 367 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AC083982.1-201ENST00000485679 344 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AC018437.1-201ENST00000492214 406 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 RPL22P13-201ENST00000493291 347 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AC114801.2-201ENST00000503825 781 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AC131281.1-201ENST00000522984 164 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AC084783.1-201ENST00000565846 910 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 RPL23AP87-202ENST00000573039 466 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 RN7SL652P-201ENST00000577769 300 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 MIR3667-201ENST00000581025 74 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AL139395.1-201ENST00000603662 160 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 MIR15A-201ENST00000607334 83 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AC020634.1-201ENST00000608701 549 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AL049539.1-201ENST00000611964 459 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 HMGB1P24-202ENST00000615653 685 ntBASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF111Q6ZNA4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms