Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATP2B3Q16720 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
ATP2B3Q16720 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATP2B3Q16720 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATP2B3Q16720 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
ATP2B3Q16720 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATP2B3Q16720 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
ATP2B3Q16720 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.34□□□□□ -1.71
ATP2B3Q16720 RNA5SP50-201ENST00000363731 107 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
ATP2B3Q16720 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
ATP2B3Q16720 RNU6-877P-201ENST00000383868 107 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 FGF7P8-201ENST00000402994 292 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 RNU6-908P-201ENST00000410160 94 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 MTCO3P12-201ENST00000416718 547 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 OR1AA1P-201ENST00000419597 916 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 GPR143P-201ENST00000434155 205 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATP2B3Q16720 HMGB3P12-201ENST00000438745 556 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 MTND5P20-201ENST00000448677 143 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.34□□□□□ -1.71
ATP2B3Q16720 U3.44-201ENST00000458938 192 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AC008628.2-201ENST00000502605 298 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AC117522.1-201ENST00000509821 380 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.34□□□□□ -1.71
ATP2B3Q16720 Y_RNA.702-201ENST00000516843 96 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 RN7SKP116-201ENST00000516902 319 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AP003034.1-201ENST00000534621 422 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 SETP2-201ENST00000553886 926 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.34□□□□□ -1.71
ATP2B3Q16720 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.34□□□□□ -1.71
ATP2B3Q16720 COX6CP3-201ENST00000580869 223 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AC090616.5-202ENST00000582111 297 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.34□□□□□ -1.71
ATP2B3Q16720 IGHV3-29-201ENST00000604817 344 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AC012468.1-201ENST00000604888 430 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AC009994.1-201ENST00000606889 253 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AC103710.2-201ENST00000609912 942 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AL359314.1-201ENST00000616913 261 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AC009033.1-201ENST00000624279 431 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AC009161.2-201ENST00000624626 138 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATP2B3Q16720 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATP2B3Q16720 AL138713.1-201ENST00000624026 2130 ntBASIC4.34□□□□□ -1.71
ATP2B3Q16720 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
ATP2B3Q16720 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATP2B3Q16720 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATP2B3Q16720 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATP2B3Q16720 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATP2B3Q16720 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 ZNF680P1-201ENST00000436625 1469 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 FRG1CP-201ENST00000358464 769 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 RNU4-35P-201ENST00000362588 141 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 RNY1P12-201ENST00000364251 105 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 RNA5SP42-201ENST00000364278 115 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 RNU6-821P-201ENST00000390995 107 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 RNU6-1158P-201ENST00000391167 107 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 RNA5SP239-201ENST00000410218 129 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC017079.2-201ENST00000416102 485 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 BX842559.1-201ENST00000419615 532 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC008155.2-201ENST00000464337 397 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 RPS3AP50-201ENST00000487064 803 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC025465.4-201ENST00000513422 638 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 SNORA70.14-201ENST00000516205 110 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AL512310.1-201ENST00000548639 172 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC060780.3-201ENST00000589464 80 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 AP001429.1-201ENST00000602568 530 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC008945.2-201ENST00000606056 604 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 AL121992.2-201ENST00000606262 256 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.33□□□□□ -1.72
ATP2B3Q16720 RMST_3.1-201ENST00000611651 109 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 AC022140.2-201ENST00000623500 188 ntBASIC4.33□□□□□ -1.72
ATP2B3Q16720 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATP2B3Q16720 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATP2B3Q16720 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATP2B3Q16720 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms