Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.99□□□□□ -2.09
SSX1Q16384 RPL30P9-201ENST00000465586 330 ntBASIC1.99□□□□□ -2.09
SSX1Q16384 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SSX1Q16384 MRPL42P6-201ENST00000486397 371 ntBASIC1.99□□□□□ -2.09
SSX1Q16384 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.99□□□□□ -2.09
SSX1Q16384 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.99□□□□□ -2.09
SSX1Q16384 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.99□□□□□ -2.09
SSX1Q16384 AC138853.1-201ENST00000503549 823 ntBASIC1.99□□□□□ -2.09
SSX1Q16384 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.99□□□□□ -2.09
SSX1Q16384 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.99□□□□□ -2.09
SSX1Q16384 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.99□□□□□ -2.09
SSX1Q16384 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.99□□□□□ -2.09
SSX1Q16384 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.99□□□□□ -2.09
SSX1Q16384 AC005951.2-201ENST00000576282 495 ntBASIC1.99□□□□□ -2.09
SSX1Q16384 MIR5007-201ENST00000583098 95 ntBASIC1.99□□□□□ -2.09
SSX1Q16384 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.99□□□□□ -2.09
SSX1Q16384 AC005498.1-201ENST00000592125 465 ntBASIC1.99□□□□□ -2.09
SSX1Q16384 BNIP3P19-201ENST00000605397 577 ntBASIC1.99□□□□□ -2.09
SSX1Q16384 AC093673.2-201ENST00000609674 331 ntBASIC1.99□□□□□ -2.09
SSX1Q16384 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.99□□□□□ -2.09
SSX1Q16384 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SSX1Q16384 MIR4275-201ENST00000636486 87 ntBASIC1.99□□□□□ -2.09
SSX1Q16384 ZNF833P-201ENST00000424938 1494 ntBASIC1.99□□□□□ -2.09
SSX1Q16384 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.99□□□□□ -2.09
SSX1Q16384 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.98□□□□□ -2.09
SSX1Q16384 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSX1Q16384 RNU6-359P-201ENST00000365466 108 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
SSX1Q16384 RNU6-741P-201ENST00000383889 107 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 MIR34A-201ENST00000385130 110 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 SNORA40.2-201ENST00000390847 128 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 AL109755.1-201ENST00000401791 649 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 RNA5SP184-201ENST00000411071 108 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 BX119904.4-201ENST00000424402 301 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 ARL5AP4-201ENST00000430731 512 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.98□□□□□ -2.09
SSX1Q16384 AL021397.1-201ENST00000451806 248 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.98□□□□□ -2.09
SSX1Q16384 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.98□□□□□ -2.09
SSX1Q16384 RPS20P20-201ENST00000460498 340 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 AC097493.1-201ENST00000463958 372 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 AC107626.1-201ENST00000471084 183 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 AC069528.1-202ENST00000482888 637 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.98□□□□□ -2.09
SSX1Q16384 RPL23AP49-201ENST00000492925 468 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 AC093752.1-206ENST00000511823 336 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 COX6CP8-201ENST00000522620 226 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SSX1Q16384 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.98□□□□□ -2.09
SSX1Q16384 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.98□□□□□ -2.09
SSX1Q16384 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.98□□□□□ -2.09
SSX1Q16384 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.98□□□□□ -2.09
SSX1Q16384 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.98□□□□□ -2.09
SSX1Q16384 HMGN2P15-201ENST00000585707 270 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 AL161729.4-201ENST00000604650 476 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 RPL21P136-201ENST00000605378 396 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 AC024060.1-201ENST00000607052 494 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.98□□□□□ -2.09
SSX1Q16384 AC107294.1-201ENST00000609524 467 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.98□□□□□ -2.09
SSX1Q16384 AC013476.2-201ENST00000614456 459 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 AL158163.2-201ENST00000619110 700 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 CU459211.1-201ENST00000635667 749 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.98□□□□□ -2.09
SSX1Q16384 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSX1Q16384 AL079343.1-201ENST00000572358 1771 ntBASIC1.98□□□□□ -2.09
SSX1Q16384 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SSX1Q16384 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.97□□□□□ -2.09
SSX1Q16384 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SSX1Q16384 OR5J1P-201ENST00000313544 939 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 RNU6-1078P-201ENST00000364522 103 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 RNU1-52P-201ENST00000384190 164 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.97□□□□□ -2.09
SSX1Q16384 TPMTP3-201ENST00000411928 735 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 Z75741.2-201ENST00000417272 1167 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.97□□□□□ -2.09
SSX1Q16384 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.97□□□□□ -2.09
SSX1Q16384 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SSX1Q16384 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 UBE2V1P13-201ENST00000436983 439 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.97□□□□□ -2.09
SSX1Q16384 ATG12P2-201ENST00000456830 416 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SSX1Q16384 AC080014.1-201ENST00000496877 1201 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.97□□□□□ -2.09
SSX1Q16384 SUMO2P5-201ENST00000506790 245 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.97□□□□□ -2.09
SSX1Q16384 NRON-201ENST00000517270 370 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.97□□□□□ -2.09
SSX1Q16384 AC025755.1-201ENST00000521306 278 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.97□□□□□ -2.09
SSX1Q16384 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SSX1Q16384 AP003497.1-201ENST00000528472 562 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 AC087465.1-201ENST00000560574 245 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 AL132657.2-201ENST00000564417 358 ntBASIC1.97□□□□□ -2.09
SSX1Q16384 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.97□□□□□ -2.09
SSX1Q16384 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.97□□□□□ -2.09
SSX1Q16384 AL451007.1-201ENST00000595491 289 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms