Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSRP1Q08945 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSRP1Q08945 AC016588.2-201ENST00000632484 3021 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSRP1Q08945 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSRP1Q08945 DEFB108F-201ENST00000344638 222 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 SNORA7.2-201ENST00000364446 145 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 SNORA70.2-201ENST00000364506 135 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 RNU6-116P-201ENST00000384042 109 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 SNORA70C-201ENST00000384538 135 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 RNU6-14P-201ENST00000384630 106 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AL022722.2-201ENST00000402519 180 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AL356432.1-201ENST00000405809 419 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 RNA5SP104-201ENST00000410989 118 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 RN7SKP140-201ENST00000411196 284 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 BX323014.1-201ENST00000412876 237 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.66□□□□□ -1.66
SSRP1Q08945 TAAR7P-201ENST00000436141 242 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.66□□□□□ -1.66
SSRP1Q08945 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.66□□□□□ -1.66
SSRP1Q08945 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSRP1Q08945 RPL23AP31-201ENST00000456160 467 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 snoU13.4-201ENST00000458916 104 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 TRBV1-201ENST00000476502 284 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AC092451.1-201ENST00000480211 153 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.66□□□□□ -1.66
SSRP1Q08945 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.66□□□□□ -1.66
SSRP1Q08945 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AC078817.1-201ENST00000492623 435 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 RPL31P61-201ENST00000496160 376 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.66□□□□□ -1.66
SSRP1Q08945 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.66□□□□□ -1.66
SSRP1Q08945 RNU7-30P-201ENST00000516835 62 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.66□□□□□ -1.66
SSRP1Q08945 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.66□□□□□ -1.66
SSRP1Q08945 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.66□□□□□ -1.66
SSRP1Q08945 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.66□□□□□ -1.66
SSRP1Q08945 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.66□□□□□ -1.66
SSRP1Q08945 RPS3AP23-202ENST00000574601 686 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 MIR5583-1-201ENST00000580941 59 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.66□□□□□ -1.66
SSRP1Q08945 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.66□□□□□ -1.66
SSRP1Q08945 AL670379.4-201ENST00000605279 254 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AL158032.1-201ENST00000605401 106 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 uc_338.5-201ENST00000611839 155 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AC005858.4-201ENST00000623191 700 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 MTND5P42-201ENST00000637720 498 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AC112487.2-201ENST00000637950 304 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 AP004289.2-201ENST00000444413 1457 ntBASIC4.66□□□□□ -1.66
SSRP1Q08945 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.66□□□□□ -1.66
SSRP1Q08945 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSRP1Q08945 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSRP1Q08945 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSRP1Q08945 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSRP1Q08945 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSRP1Q08945 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SSRP1Q08945 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSRP1Q08945 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.65□□□□□ -1.66
SSRP1Q08945 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SSRP1Q08945 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSRP1Q08945 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSRP1Q08945 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSRP1Q08945 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
SSRP1Q08945 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSRP1Q08945 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.65□□□□□ -1.67
SSRP1Q08945 U3.12-201ENST00000364498 214 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 MTND3P8-201ENST00000412909 339 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AL356095.1-201ENST00000417217 199 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.65□□□□□ -1.67
SSRP1Q08945 AL451054.2-201ENST00000420896 202 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.65□□□□□ -1.67
SSRP1Q08945 HMGB1P27-201ENST00000431429 603 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AL353748.1-201ENST00000440753 474 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 NDUFS5P3-201ENST00000450668 321 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 RNU6-1208P-201ENST00000459588 107 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AC010469.1-201ENST00000463864 576 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 RPL5P30-201ENST00000465511 891 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AC103987.1-201ENST00000473394 348 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 Y_RNA.654-201ENST00000497848 106 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AC078918.1-201ENST00000498515 228 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 CCDC34P1-201ENST00000507441 517 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 FGF7P4-201ENST00000509595 295 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AC112206.3-201ENST00000514578 389 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.65□□□□□ -1.67
SSRP1Q08945 Y_RNA.689-201ENST00000516589 107 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 IGKV2D-23-201ENST00000518179 286 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.65□□□□□ -1.67
SSRP1Q08945 AC091516.1-201ENST00000549191 703 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AL118558.2-201ENST00000556294 238 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.65□□□□□ -1.67
SSRP1Q08945 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.65□□□□□ -1.67
SSRP1Q08945 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.65□□□□□ -1.67
SSRP1Q08945 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.65□□□□□ -1.67
SSRP1Q08945 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.65□□□□□ -1.67
SSRP1Q08945 AL590392.1-201ENST00000604960 446 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AL591034.3-201ENST00000605511 685 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 RNU4-89P-201ENST00000607443 133 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 AC128687.2-201ENST00000609657 566 ntBASIC4.65□□□□□ -1.67
SSRP1Q08945 MIR6867-201ENST00000610636 67 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms