Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 HMGB1P1-201ENST00000522557 636 ntBASIC2.17□□□□□ -2.06
TPM4P67936 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.17□□□□□ -2.06
TPM4P67936 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.17□□□□□ -2.06
TPM4P67936 AC090502.2-201ENST00000549267 280 ntBASIC2.17□□□□□ -2.06
TPM4P67936 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.17□□□□□ -2.06
TPM4P67936 AC040174.2-201ENST00000602701 465 ntBASIC2.17□□□□□ -2.06
TPM4P67936 Y_RNA.783-201ENST00000613546 102 ntBASIC2.17□□□□□ -2.06
TPM4P67936 AC104307.1-201ENST00000616142 196 ntBASIC2.17□□□□□ -2.06
TPM4P67936 MIR6130-201ENST00000619419 109 ntBASIC2.17□□□□□ -2.06
TPM4P67936 AC080188.3-201ENST00000624842 748 ntBASIC2.17□□□□□ -2.06
TPM4P67936 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
TPM4P67936 AL136360.1-201ENST00000503377 1900 ntBASIC2.17□□□□□ -2.06
TPM4P67936 RNU6-525P-201ENST00000363685 104 ntBASIC2.16□□□□□ -2.06
TPM4P67936 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TPM4P67936 RNU6-1083P-201ENST00000384022 107 ntBASIC2.16□□□□□ -2.06
TPM4P67936 CIR1P3-201ENST00000405137 479 ntBASIC2.16□□□□□ -2.06
TPM4P67936 RNU2-49P-201ENST00000410666 184 ntBASIC2.16□□□□□ -2.06
TPM4P67936 CCDC58P2-201ENST00000417131 366 ntBASIC2.16□□□□□ -2.06
TPM4P67936 AC092634.6-201ENST00000418558 192 ntBASIC2.16□□□□□ -2.06
TPM4P67936 EIF4EP4-201ENST00000424916 578 ntBASIC2.16□□□□□ -2.06
TPM4P67936 MTCYBP45-201ENST00000435243 565 ntBASIC2.16□□□□□ -2.06
TPM4P67936 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.16□□□□□ -2.06
TPM4P67936 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.16□□□□□ -2.06
TPM4P67936 SUMO2P2-201ENST00000456482 255 ntBASIC2.16□□□□□ -2.06
TPM4P67936 GTF2IP12-201ENST00000456547 356 ntBASIC2.16□□□□□ -2.06
TPM4P67936 AC108729.2-201ENST00000476543 840 ntBASIC2.16□□□□□ -2.06
TPM4P67936 RPL21P47-201ENST00000483696 477 ntBASIC2.16□□□□□ -2.06
TPM4P67936 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.16□□□□□ -2.06
TPM4P67936 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.16□□□□□ -2.06
TPM4P67936 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.16□□□□□ -2.06
TPM4P67936 AC118465.1-201ENST00000513820 1271 ntBASIC2.16□□□□□ -2.06
TPM4P67936 RNU2-44P-201ENST00000516795 194 ntBASIC2.16□□□□□ -2.06
TPM4P67936 AP003122.3-201ENST00000526316 255 ntBASIC2.16□□□□□ -2.06
TPM4P67936 AC024224.1-201ENST00000538284 609 ntBASIC2.16□□□□□ -2.06
TPM4P67936 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.16□□□□□ -2.06
TPM4P67936 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.16□□□□□ -2.06
TPM4P67936 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.16□□□□□ -2.06
TPM4P67936 AC009063.1-201ENST00000563342 702 ntBASIC2.16□□□□□ -2.06
TPM4P67936 ADAM3B-201ENST00000569937 840 ntBASIC2.16□□□□□ -2.06
TPM4P67936 MIR3122-201ENST00000577243 73 ntBASIC2.16□□□□□ -2.06
TPM4P67936 MIR5089-201ENST00000580047 84 ntBASIC2.16□□□□□ -2.06
TPM4P67936 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TPM4P67936 AL356266.1-201ENST00000623311 483 ntBASIC2.16□□□□□ -2.06
TPM4P67936 AC004520.1-201ENST00000608362 1413 ntBASIC2.16□□□□□ -2.06
TPM4P67936 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
TPM4P67936 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
TPM4P67936 RNU6-839P-201ENST00000363347 108 ntBASIC2.15□□□□□ -2.07
TPM4P67936 Y_RNA.333-201ENST00000365274 102 ntBASIC2.15□□□□□ -2.07
TPM4P67936 RNU6-741P-201ENST00000383889 107 ntBASIC2.15□□□□□ -2.07
TPM4P67936 AC008173.1-201ENST00000418901 264 ntBASIC2.15□□□□□ -2.07
TPM4P67936 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.15□□□□□ -2.07
TPM4P67936 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.15□□□□□ -2.07
TPM4P67936 AC068781.1-201ENST00000488231 618 ntBASIC2.15□□□□□ -2.07
TPM4P67936 AC098591.2-201ENST00000510152 315 ntBASIC2.15□□□□□ -2.07
TPM4P67936 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.15□□□□□ -2.07
TPM4P67936 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.15□□□□□ -2.07
TPM4P67936 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.15□□□□□ -2.07
TPM4P67936 AL132857.1-201ENST00000555180 708 ntBASIC2.15□□□□□ -2.07
TPM4P67936 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.15□□□□□ -2.07
TPM4P67936 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.15□□□□□ -2.07
TPM4P67936 MIR3199-1-201ENST00000582434 88 ntBASIC2.15□□□□□ -2.07
TPM4P67936 AC008749.1-201ENST00000597650 306 ntBASIC2.15□□□□□ -2.07
TPM4P67936 AC004067.1-201ENST00000608733 700 ntBASIC2.15□□□□□ -2.07
TPM4P67936 AP001521.1-201ENST00000609150 300 ntBASIC2.15□□□□□ -2.07
TPM4P67936 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.15□□□□□ -2.07
TPM4P67936 AC243829.7-201ENST00000633081 225 ntBASIC2.15□□□□□ -2.07
TPM4P67936 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.14□□□□□ -2.07
TPM4P67936 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TPM4P67936 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TPM4P67936 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TPM4P67936 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TPM4P67936 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.14□□□□□ -2.07
TPM4P67936 RNA5SP80-201ENST00000410475 111 ntBASIC2.14□□□□□ -2.07
TPM4P67936 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.14□□□□□ -2.07
TPM4P67936 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.14□□□□□ -2.07
TPM4P67936 AC019178.2-201ENST00000423595 505 ntBASIC2.14□□□□□ -2.07
TPM4P67936 HMGN2P19-201ENST00000425149 265 ntBASIC2.14□□□□□ -2.07
TPM4P67936 AC124916.1-201ENST00000444020 547 ntBASIC2.14□□□□□ -2.07
TPM4P67936 MTND2P24-201ENST00000453434 806 ntBASIC2.14□□□□□ -2.07
TPM4P67936 AL121769.1-201ENST00000469473 401 ntBASIC2.14□□□□□ -2.07
TPM4P67936 AC055731.1-201ENST00000474387 401 ntBASIC2.14□□□□□ -2.07
TPM4P67936 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TPM4P67936 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.14□□□□□ -2.07
TPM4P67936 AC022447.3-201ENST00000506865 495 ntBASIC2.14□□□□□ -2.07
TPM4P67936 AC108043.1-201ENST00000512696 574 ntBASIC2.14□□□□□ -2.07
TPM4P67936 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TPM4P67936 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.14□□□□□ -2.07
TPM4P67936 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.14□□□□□ -2.07
TPM4P67936 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.14□□□□□ -2.07
TPM4P67936 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.14□□□□□ -2.07
TPM4P67936 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.14□□□□□ -2.07
TPM4P67936 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.14□□□□□ -2.07
TPM4P67936 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.14□□□□□ -2.07
TPM4P67936 AC008121.1-201ENST00000603244 268 ntBASIC2.14□□□□□ -2.07
TPM4P67936 MTND4LP5-201ENST00000605152 292 ntBASIC2.14□□□□□ -2.07
TPM4P67936 AC244517.12-201ENST00000623581 663 ntBASIC2.14□□□□□ -2.07
TPM4P67936 AC104820.1-201ENST00000624183 307 ntBASIC2.14□□□□□ -2.07
TPM4P67936 MIR7157-201ENST00000635801 60 ntBASIC2.14□□□□□ -2.07
TPM4P67936 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.14□□□□□ -2.07
TPM4P67936 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms