Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.54□□□□□ -1.84
CLCN3P51790 AC131902.3-201ENST00000611767 581 ntBASIC3.54□□□□□ -1.84
CLCN3P51790 AC018692.3-201ENST00000623929 123 ntBASIC3.54□□□□□ -1.84
CLCN3P51790 AL159972.1-201ENST00000625150 448 ntBASIC3.54□□□□□ -1.84
CLCN3P51790 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLCN3P51790 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLCN3P51790 AC027514.1-201ENST00000588561 1603 ntBASIC3.54□□□□□ -1.84
CLCN3P51790 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.54□□□□□ -1.84
CLCN3P51790 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.54□□□□□ -1.84
CLCN3P51790 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLCN3P51790 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
CLCN3P51790 DDX10P1-201ENST00000448545 1933 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 RNU6-259P-201ENST00000383999 107 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 RNU6-432P-201ENST00000384196 109 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 PPP1R11P2-201ENST00000423543 382 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 HMGB1P12-201ENST00000438594 598 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.53□□□□□ -1.84
CLCN3P51790 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCN3P51790 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.53□□□□□ -1.84
CLCN3P51790 AC126182.1-201ENST00000478134 357 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 NIPA2P2-201ENST00000496376 1083 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.53□□□□□ -1.84
CLCN3P51790 MTND4LP26-201ENST00000518144 282 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 AP003467.2-201ENST00000520175 319 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 AC022616.6-201ENST00000520479 119 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCN3P51790 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.53□□□□□ -1.84
CLCN3P51790 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.53□□□□□ -1.84
CLCN3P51790 TPRKBP2-201ENST00000565969 475 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCN3P51790 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCN3P51790 UBL5P2-201ENST00000583788 219 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 BNIP3P8-201ENST00000597863 560 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 SEPT7P9-203ENST00000604116 343 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 RNU6-87P-201ENST00000607561 108 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.53□□□□□ -1.84
CLCN3P51790 uc_338.25-201ENST00000613756 156 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 AL603758.1-201ENST00000618654 241 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 AC019226.1-201ENST00000625666 515 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 AC010149.2-201ENST00000637608 315 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLCN3P51790 MTND5P26-201ENST00000426018 1752 ntBASIC3.53□□□□□ -1.84
CLCN3P51790 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLCN3P51790 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.53□□□□□ -1.85
CLCN3P51790 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CLCN3P51790 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.53□□□□□ -1.85
CLCN3P51790 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCN3P51790 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CLCN3P51790 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.52□□□□□ -1.85
CLCN3P51790 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.52□□□□□ -1.85
CLCN3P51790 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLCN3P51790 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.52□□□□□ -1.85
CLCN3P51790 DEFB108F-201ENST00000344638 222 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 RNU5E-8P-201ENST00000363502 116 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 RNU5A-8P-201ENST00000364102 114 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 RNU6-76P-201ENST00000384060 104 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 USP9YP13-201ENST00000417797 480 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.52□□□□□ -1.85
CLCN3P51790 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCN3P51790 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCN3P51790 CST9LP2-201ENST00000437612 320 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 FTH1P1-201ENST00000437933 532 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AC244505.5-201ENST00000443639 207 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 NANOGNBP1-201ENST00000448444 480 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 MRPS31P2-201ENST00000451581 518 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AL033528.1-201ENST00000453780 140 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AC108059.3-201ENST00000456388 214 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 snoU109.1-201ENST00000459339 135 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 KLF3P2-201ENST00000465138 268 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 TMED11P-201ENST00000479478 690 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AP001086.1-201ENST00000494882 321 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AC105252.1-201ENST00000503089 286 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCN3P51790 AC011352.1-201ENST00000512300 793 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 GMPSP1-201ENST00000514075 579 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 RNU6-798P-201ENST00000516912 103 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AP003392.2-201ENST00000527269 208 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 DEFB108D-201ENST00000527787 222 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AP000857.1-201ENST00000532151 543 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.52□□□□□ -1.85
CLCN3P51790 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCN3P51790 AC121334.2-201ENST00000605387 271 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AC126118.1-201ENST00000607744 628 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AC007038.2-201ENST00000608095 740 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AC007684.1-201ENST00000609671 477 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 BX664608.1-201ENST00000610519 487 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 ATP5A1P2-202ENST00000616464 443 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CLCN3P51790 AC048347.1-201ENST00000624621 427 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 AL160394.1-201ENST00000624765 724 ntBASIC3.52□□□□□ -1.85
CLCN3P51790 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.52□□□□□ -1.85
CLCN3P51790 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCN3P51790 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CLCN3P51790 AC138915.3-201ENST00000562908 1389 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLCN3P51790 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CLCN3P51790 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
CLCN3P51790 MIR422A-201ENST00000362286 90 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 RNU6-1283P-201ENST00000365314 105 ntBASIC3.51□□□□□ -1.85
CLCN3P51790 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms