Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC104027.1-201ENST00000521887 300 ntBASIC2.89□□□□□ -1.95
CDX1P47902 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX1P47902 AP002453.2-201ENST00000533503 320 ntBASIC2.89□□□□□ -1.95
CDX1P47902 AC012414.6-201ENST00000568241 401 ntBASIC2.89□□□□□ -1.95
CDX1P47902 MIR3682-201ENST00000581338 84 ntBASIC2.89□□□□□ -1.95
CDX1P47902 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX1P47902 AC136601.2-201ENST00000604356 474 ntBASIC2.89□□□□□ -1.95
CDX1P47902 MIR92B-201ENST00000607575 96 ntBASIC2.89□□□□□ -1.95
CDX1P47902 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX1P47902 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX1P47902 AC034102.8-201ENST00000615146 484 ntBASIC2.89□□□□□ -1.95
CDX1P47902 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.89□□□□□ -1.95
CDX1P47902 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX1P47902 AC110774.1-201ENST00000623567 2018 ntBASIC2.89□□□□□ -1.95
CDX1P47902 AL603839.4-201ENST00000624658 1005 ntBASIC2.89□□□□□ -1.95
CDX1P47902 AC099654.13-201ENST00000639774 207 ntBASIC2.89□□□□□ -1.95
CDX1P47902 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX1P47902 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX1P47902 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX1P47902 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.88□□□□□ -1.95
CDX1P47902 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.88□□□□□ -1.95
CDX1P47902 AC007656.2-201ENST00000624902 4547 ntBASIC2.88□□□□□ -1.95
CDX1P47902 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDX1P47902 UBE2L2-201ENST00000254302 429 ntBASIC2.88□□□□□ -1.95
CDX1P47902 FGF7P2-201ENST00000332473 296 ntBASIC2.88□□□□□ -1.95
CDX1P47902 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDX1P47902 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDX1P47902 RNU6-511P-201ENST00000363496 107 ntBASIC2.88□□□□□ -1.95
CDX1P47902 RNY1P12-201ENST00000364251 105 ntBASIC2.88□□□□□ -1.95
CDX1P47902 RNU4-91P-201ENST00000364778 135 ntBASIC2.88□□□□□ -1.95
CDX1P47902 RNU6-1027P-201ENST00000383998 107 ntBASIC2.88□□□□□ -1.95
CDX1P47902 MIR1302-8-201ENST00000408342 128 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AC127391.1-201ENST00000411737 98 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.88□□□□□ -1.95
CDX1P47902 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX1P47902 ELOCP4-201ENST00000420090 333 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDX1P47902 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.88□□□□□ -1.95
CDX1P47902 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.88□□□□□ -1.95
CDX1P47902 AC007283.2-201ENST00000424739 197 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.88□□□□□ -1.95
CDX1P47902 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX1P47902 MTND4P25-201ENST00000441039 533 ntBASIC2.88□□□□□ -1.95
CDX1P47902 MTND6P13-201ENST00000443510 523 ntBASIC2.88□□□□□ -1.95
CDX1P47902 MTND2P4-201ENST00000445034 1004 ntBASIC2.88□□□□□ -1.95
CDX1P47902 RPL12P25-201ENST00000455592 494 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.88□□□□□ -1.95
CDX1P47902 AC233702.1-201ENST00000482905 502 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AC245166.1-201ENST00000521012 253 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AP006587.4-201ENST00000526053 529 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.88□□□□□ -1.95
CDX1P47902 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.88□□□□□ -1.95
CDX1P47902 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX1P47902 AC006504.3-201ENST00000586818 523 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.88□□□□□ -1.95
CDX1P47902 AC010620.1-201ENST00000601088 1102 ntBASIC2.88□□□□□ -1.95
CDX1P47902 FTX_3.1-201ENST00000610451 147 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AC019176.2-201ENST00000611579 315 ntBASIC2.88□□□□□ -1.95
CDX1P47902 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDX1P47902 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDX1P47902 AL133173.2-201ENST00000614270 90 ntBASIC2.88□□□□□ -1.95
CDX1P47902 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AC110994.2-201ENST00000635481 492 ntBASIC2.88□□□□□ -1.95
CDX1P47902 AL034408.1-202ENST00000636088 415 ntBASIC2.88□□□□□ -1.95
CDX1P47902 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDX1P47902 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.88□□□□□ -1.95
CDX1P47902 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.88□□□□□ -1.95
CDX1P47902 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CDX1P47902 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDX1P47902 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDX1P47902 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.88□□□□□ -1.95
CDX1P47902 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDX1P47902 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDX1P47902 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CDX1P47902 RNU5E-1-201ENST00000362477 120 ntBASIC2.87□□□□□ -1.95
CDX1P47902 SNORD56.2-201ENST00000363242 71 ntBASIC2.87□□□□□ -1.95
CDX1P47902 SNORD56.3-201ENST00000363507 71 ntBASIC2.87□□□□□ -1.95
CDX1P47902 RNU6-512P-201ENST00000364438 103 ntBASIC2.87□□□□□ -1.95
CDX1P47902 RNU5E-6P-201ENST00000365574 115 ntBASIC2.87□□□□□ -1.95
CDX1P47902 SAR1AP2-201ENST00000392696 594 ntBASIC2.87□□□□□ -1.95
CDX1P47902 RN7SKP142-201ENST00000411236 328 ntBASIC2.87□□□□□ -1.95
CDX1P47902 ATP5A1P2-201ENST00000412323 255 ntBASIC2.87□□□□□ -1.95
CDX1P47902 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.87□□□□□ -1.95
CDX1P47902 ZNF90P2-204ENST00000419323 1075 ntBASIC2.87□□□□□ -1.95
CDX1P47902 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.87□□□□□ -1.95
CDX1P47902 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.87□□□□□ -1.95
CDX1P47902 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.87□□□□□ -1.95
CDX1P47902 PGBD4P3-201ENST00000440731 581 ntBASIC2.87□□□□□ -1.95
CDX1P47902 HMGN1P18-201ENST00000457642 277 ntBASIC2.87□□□□□ -1.95
CDX1P47902 MTCO2P29-201ENST00000465212 189 ntBASIC2.87□□□□□ -1.95
CDX1P47902 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.87□□□□□ -1.95
CDX1P47902 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.87□□□□□ -1.95
CDX1P47902 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.87□□□□□ -1.95
CDX1P47902 RNU7-51P-201ENST00000516560 62 ntBASIC2.87□□□□□ -1.95
CDX1P47902 RNU2-46P-201ENST00000517038 113 ntBASIC2.87□□□□□ -1.95
CDX1P47902 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.87□□□□□ -1.95
CDX1P47902 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.87□□□□□ -1.95
CDX1P47902 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.87□□□□□ -1.95
CDX1P47902 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.87□□□□□ -1.95
CDX1P47902 RPS3AP4-201ENST00000555161 764 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms