Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MTCYBP16-201ENST00000509187 1129 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 RNU6-1282P-201ENST00000516735 96 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 RNU6-1028P-201ENST00000517164 93 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFSF9P41273 AP002748.2-201ENST00000528671 348 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.42□□□□□ -2.02
TNFSF9P41273 HIGD1AP17-201ENST00000554576 276 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 AC010546.1-201ENST00000569391 485 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 MIR4648-201ENST00000580107 72 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 VN1R78P-201ENST00000597393 564 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 AC069545.1-201ENST00000605671 358 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFSF9P41273 AC004696.1-201ENST00000614345 607 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.42□□□□□ -2.02
TNFSF9P41273 AC010297.1-201ENST00000623948 149 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
TNFSF9P41273 ZNF519P1-201ENST00000449011 1626 ntBASIC2.42□□□□□ -2.02
TNFSF9P41273 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TNFSF9P41273 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
TNFSF9P41273 AL049641.1-201ENST00000441055 1948 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 RNU6-224P-201ENST00000384055 107 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 MIR627-201ENST00000384979 97 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 MTND4P3-201ENST00000417829 541 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.41□□□□□ -2.02
TNFSF9P41273 DPH3P2-201ENST00000422618 250 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 PTP4A1P7-201ENST00000423476 514 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 PPP1R11P2-201ENST00000423543 382 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 AL356320.1-201ENST00000429616 163 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.41□□□□□ -2.02
TNFSF9P41273 AL109741.2-201ENST00000455561 343 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 snoU13.8-201ENST00000458890 104 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 RPL31P41-201ENST00000477967 372 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 AC008427.1-201ENST00000503102 655 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 SNORA19.3-201ENST00000516165 130 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 RN7SKP31-201ENST00000516354 278 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 SCARNA15.2-201ENST00000516409 127 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.41□□□□□ -2.02
TNFSF9P41273 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.41□□□□□ -2.02
TNFSF9P41273 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TNFSF9P41273 MIR6130-201ENST00000619419 109 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 AP003485.1-201ENST00000625093 753 ntBASIC2.41□□□□□ -2.02
TNFSF9P41273 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.41□□□□□ -2.02
TNFSF9P41273 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
TNFSF9P41273 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TNFSF9P41273 MIR504-201ENST00000385065 83 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 MTND4P13-201ENST00000402078 1023 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFSF9P41273 RNA5SP492-201ENST00000411330 114 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 AC096533.1-201ENST00000411645 353 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.4□□□□□ -2.03
TNFSF9P41273 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFSF9P41273 USP9YP21-201ENST00000420603 432 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.4□□□□□ -2.03
TNFSF9P41273 AC008850.1-201ENST00000427546 362 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFSF9P41273 MTND2P20-201ENST00000440805 661 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 MTCYBP3-201ENST00000445588 1137 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 WASF1P1-201ENST00000447560 1131 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 RPS15AP27-201ENST00000449183 343 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFSF9P41273 AC069528.1-202ENST00000482888 637 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 LARP1BP2-201ENST00000486594 519 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 RPS15AP34-201ENST00000487776 387 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFSF9P41273 AC016550.1-201ENST00000505348 785 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 RNU6-583P-201ENST00000516012 92 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.4□□□□□ -2.03
TNFSF9P41273 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.4□□□□□ -2.03
TNFSF9P41273 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.4□□□□□ -2.03
TNFSF9P41273 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFSF9P41273 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.4□□□□□ -2.03
TNFSF9P41273 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.4□□□□□ -2.03
TNFSF9P41273 AC068620.3-201ENST00000602749 560 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 AC069304.2-201ENST00000605154 435 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 AC009237.15-201ENST00000610252 501 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TNFSF9P41273 AC002550.2-201ENST00000621246 394 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TNFSF9P41273 AC106858.1-201ENST00000637497 429 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 AC007785.2-201ENST00000598627 1916 ntBASIC2.4□□□□□ -2.03
TNFSF9P41273 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TNFSF9P41273 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.4□□□□□ -2.03
TNFSF9P41273 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TNFSF9P41273 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
TNFSF9P41273 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TNFSF9P41273 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TNFSF9P41273 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TNFSF9P41273 snoZ40.1-201ENST00000364540 72 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 RNU1-109P-201ENST00000383960 147 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 RNU1-138P-201ENST00000384093 164 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 Y_RNA.548-201ENST00000384656 105 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AL355143.1-201ENST00000407101 841 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.39□□□□□ -2.03
TNFSF9P41273 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.39□□□□□ -2.03
TNFSF9P41273 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TNFSF9P41273 MTND4P6-201ENST00000438297 472 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 RNU7-23P-201ENST00000459465 62 ntBASIC2.39□□□□□ -2.03
TNFSF9P41273 AC087588.1-201ENST00000462203 316 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms