Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CNGA1P29973 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.51□□□□□ -1.69
CNGA1P29973 SNORA74D-201ENST00000516404 141 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 RNU6-1178P-201ENST00000516674 107 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.51□□□□□ -1.69
CNGA1P29973 AP000889.1-201ENST00000530968 660 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.51□□□□□ -1.69
CNGA1P29973 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.51□□□□□ -1.69
CNGA1P29973 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.51□□□□□ -1.69
CNGA1P29973 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.51□□□□□ -1.69
CNGA1P29973 MIR3200-201ENST00000580767 85 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.51□□□□□ -1.69
CNGA1P29973 DPPA3P3-201ENST00000603842 430 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 AP001486.3-201ENST00000615334 372 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.51□□□□□ -1.69
CNGA1P29973 AP005264.7-201ENST00000625003 745 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.51□□□□□ -1.69
CNGA1P29973 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNGA1P29973 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.51□□□□□ -1.69
CNGA1P29973 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.51□□□□□ -1.69
CNGA1P29973 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNGA1P29973 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.51□□□□□ -1.69
CNGA1P29973 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNGA1P29973 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNGA1P29973 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNGA1P29973 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNGA1P29973 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.5□□□□□ -1.69
CNGA1P29973 RNU6-179P-201ENST00000363350 107 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.5□□□□□ -1.69
CNGA1P29973 RNU6-14P-201ENST00000384630 106 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.5□□□□□ -1.69
CNGA1P29973 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.5□□□□□ -1.69
CNGA1P29973 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.5□□□□□ -1.69
CNGA1P29973 USP9YP27-201ENST00000418455 438 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.5□□□□□ -1.69
CNGA1P29973 BNIP3P2-201ENST00000441221 577 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 AC016691.1-201ENST00000441321 413 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.5□□□□□ -1.69
CNGA1P29973 RNU6-261P-201ENST00000459506 102 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 AC006517.1-201ENST00000480485 328 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 MTAPP1-201ENST00000489154 819 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.5□□□□□ -1.69
CNGA1P29973 RNU6-1281P-201ENST00000516223 105 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 OR5B19P-201ENST00000531766 928 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.5□□□□□ -1.69
CNGA1P29973 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.5□□□□□ -1.69
CNGA1P29973 AC055876.1-202ENST00000567053 138 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 MIR4775-201ENST00000581168 75 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.5□□□□□ -1.69
CNGA1P29973 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.5□□□□□ -1.69
CNGA1P29973 HMGB1P50-201ENST00000605814 607 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 AC090132.2-201ENST00000615881 347 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 AC233309.1-201ENST00000619522 751 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 AC007998.5-201ENST00000622938 237 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.5□□□□□ -1.69
CNGA1P29973 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.5□□□□□ -1.69
CNGA1P29973 MTCO1P12-201ENST00000414273 1543 ntBASIC4.5□□□□□ -1.69
CNGA1P29973 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNGA1P29973 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CNGA1P29973 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.49□□□□□ -1.69
CNGA1P29973 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNGA1P29973 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.49□□□□□ -1.69
CNGA1P29973 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CNGA1P29973 SNORA62.1-201ENST00000364287 154 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 RNU6-1283P-201ENST00000365314 105 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 RNU6-61P-201ENST00000365528 109 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CNGA1P29973 RNA5SP129-201ENST00000410276 118 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 RNU2-37P-201ENST00000410695 177 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 AMD1P2-201ENST00000412936 992 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.49□□□□□ -1.69
CNGA1P29973 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.49□□□□□ -1.69
CNGA1P29973 MTND1P23-201ENST00000416931 372 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 AL596276.1-201ENST00000434465 418 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 NEFMP1-201ENST00000443423 1006 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.49□□□□□ -1.69
CNGA1P29973 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.49□□□□□ -1.69
CNGA1P29973 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.49□□□□□ -1.69
CNGA1P29973 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.49□□□□□ -1.69
CNGA1P29973 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.49□□□□□ -1.69
CNGA1P29973 RNU7-182P-201ENST00000459009 62 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.49□□□□□ -1.69
CNGA1P29973 RNU7-143P-201ENST00000516781 65 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 RNU6-835P-201ENST00000516974 104 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.49□□□□□ -1.69
CNGA1P29973 AC087499.8-201ENST00000578406 226 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.49□□□□□ -1.69
CNGA1P29973 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.49□□□□□ -1.69
CNGA1P29973 AC008752.3-201ENST00000588113 712 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 AC020914.4-201ENST00000597690 277 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 AC106900.2-201ENST00000604994 317 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 AC104458.1-201ENST00000608243 463 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 AL365204.3-201ENST00000612448 685 ntBASIC4.49□□□□□ -1.69
CNGA1P29973 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.49□□□□□ -1.69
CNGA1P29973 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CNGA1P29973 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNGA1P29973 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.49□□□□□ -1.69
CNGA1P29973 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNGA1P29973 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms