Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC104662.1-201ENST00000604448 511 ntBASIC5.41□□□□□ -1.54
RXRBP28702 AC018889.1-201ENST00000605372 397 ntBASIC5.41□□□□□ -1.54
RXRBP28702 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.41□□□□□ -1.54
RXRBP28702 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.41□□□□□ -1.54
RXRBP28702 MIR8057-201ENST00000620957 69 ntBASIC5.41□□□□□ -1.54
RXRBP28702 SAMMSON-213ENST00000641336 1521 ntBASIC5.41□□□□□ -1.54
RXRBP28702 AC100778.3-201ENST00000580060 1750 ntBASIC5.41□□□□□ -1.54
RXRBP28702 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RXRBP28702 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
RXRBP28702 AC005005.4-201ENST00000623789 16698 ntBASIC5.4□□□□□ -1.54
RXRBP28702 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RXRBP28702 MTND5P27-201ENST00000428871 1720 ntBASIC5.4□□□□□ -1.54
RXRBP28702 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.4□□□□□ -1.54
RXRBP28702 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RXRBP28702 Y_RNA.252-201ENST00000364556 101 ntBASIC5.4□□□□□ -1.54
RXRBP28702 Y_RNA.307-201ENST00000365022 117 ntBASIC5.4□□□□□ -1.54
RXRBP28702 Y_RNA.364-201ENST00000365532 101 ntBASIC5.4□□□□□ -1.54
RXRBP28702 RNY3P13-201ENST00000365542 102 ntBASIC5.4□□□□□ -1.54
RXRBP28702 RNU1-63P-201ENST00000383902 164 ntBASIC5.4□□□□□ -1.54
RXRBP28702 Y_RNA.463-201ENST00000384271 102 ntBASIC5.4□□□□□ -1.54
RXRBP28702 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RXRBP28702 RNU2-36P-201ENST00000410361 191 ntBASIC5.4□□□□□ -1.54
RXRBP28702 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.4□□□□□ -1.54
RXRBP28702 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRBP28702 AC006011.1-201ENST00000442758 349 ntBASIC5.4□□□□□ -1.54
RXRBP28702 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.4□□□□□ -1.54
RXRBP28702 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRBP28702 RNA5SP103-201ENST00000459503 118 ntBASIC5.4□□□□□ -1.54
RXRBP28702 Y_RNA.654-201ENST00000497848 106 ntBASIC5.4□□□□□ -1.54
RXRBP28702 RPS27P27-201ENST00000498779 255 ntBASIC5.4□□□□□ -1.54
RXRBP28702 RN7SKP18-201ENST00000516005 275 ntBASIC5.4□□□□□ -1.54
RXRBP28702 RNU6-635P-201ENST00000516651 102 ntBASIC5.4□□□□□ -1.54
RXRBP28702 RNU6-256P-201ENST00000516747 97 ntBASIC5.4□□□□□ -1.54
RXRBP28702 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.4□□□□□ -1.54
RXRBP28702 GNRHR2P1-201ENST00000555315 631 ntBASIC5.4□□□□□ -1.54
RXRBP28702 AC006349.1-201ENST00000555526 235 ntBASIC5.4□□□□□ -1.54
RXRBP28702 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.4□□□□□ -1.54
RXRBP28702 CYCSP40-201ENST00000575927 294 ntBASIC5.4□□□□□ -1.54
RXRBP28702 AC113195.1-201ENST00000579952 141 ntBASIC5.4□□□□□ -1.54
RXRBP28702 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.4□□□□□ -1.54
RXRBP28702 MIR8058-201ENST00000615737 89 ntBASIC5.4□□□□□ -1.54
RXRBP28702 AC015914.2-201ENST00000618167 288 ntBASIC5.4□□□□□ -1.54
RXRBP28702 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.4□□□□□ -1.54
RXRBP28702 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRBP28702 AL159972.1-201ENST00000625150 448 ntBASIC5.4□□□□□ -1.54
RXRBP28702 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RXRBP28702 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RXRBP28702 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
RXRBP28702 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RXRBP28702 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.4□□□□□ -1.55
RXRBP28702 XPOTP1-201ENST00000443317 2398 ntBASIC5.4□□□□□ -1.55
RXRBP28702 AL672167.1-204ENST00000641875 3017 ntBASIC5.4□□□□□ -1.55
RXRBP28702 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RXRBP28702 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RXRBP28702 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.39□□□□□ -1.55
RXRBP28702 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RXRBP28702 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RXRBP28702 AC009313.2-201ENST00000417893 1941 ntBASIC5.39□□□□□ -1.55
RXRBP28702 RNU6-28P-201ENST00000362378 107 ntBASIC5.39□□□□□ -1.55
RXRBP28702 SNORA60-201ENST00000362396 134 ntBASIC5.39□□□□□ -1.55
RXRBP28702 SNORD113-7-201ENST00000363762 77 ntBASIC5.39□□□□□ -1.55
RXRBP28702 RNU6-1207P-201ENST00000384343 107 ntBASIC5.39□□□□□ -1.55
RXRBP28702 Y_RNA.496-201ENST00000384444 101 ntBASIC5.39□□□□□ -1.55
RXRBP28702 SNORA48.5-201ENST00000391143 135 ntBASIC5.39□□□□□ -1.55
RXRBP28702 Y_RNA.645-201ENST00000391229 102 ntBASIC5.39□□□□□ -1.55
RXRBP28702 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.39□□□□□ -1.55
RXRBP28702 OR6C66P-201ENST00000414917 930 ntBASIC5.39□□□□□ -1.55
RXRBP28702 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.39□□□□□ -1.55
RXRBP28702 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.39□□□□□ -1.55
RXRBP28702 MED13P1-201ENST00000428342 171 ntBASIC5.39□□□□□ -1.55
RXRBP28702 CYCSP24-201ENST00000445119 316 ntBASIC5.39□□□□□ -1.55
RXRBP28702 AC128713.1-201ENST00000471495 306 ntBASIC5.39□□□□□ -1.55
RXRBP28702 AC104564.1-201ENST00000493028 407 ntBASIC5.39□□□□□ -1.55
RXRBP28702 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.39□□□□□ -1.55
RXRBP28702 AC097473.1-201ENST00000508142 408 ntBASIC5.39□□□□□ -1.55
RXRBP28702 RNA5SP360-201ENST00000516555 118 ntBASIC5.39□□□□□ -1.55
RXRBP28702 AC087854.1-201ENST00000519706 414 ntBASIC5.39□□□□□ -1.55
RXRBP28702 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.39□□□□□ -1.55
RXRBP28702 AC023442.1-201ENST00000531247 422 ntBASIC5.39□□□□□ -1.55
RXRBP28702 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RXRBP28702 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.39□□□□□ -1.55
RXRBP28702 AC091178.1-203ENST00000584586 279 ntBASIC5.39□□□□□ -1.55
RXRBP28702 AC023043.2-201ENST00000589678 1026 ntBASIC5.39□□□□□ -1.55
RXRBP28702 AC068790.3-201ENST00000602988 553 ntBASIC5.39□□□□□ -1.55
RXRBP28702 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.39□□□□□ -1.55
RXRBP28702 uc_338.34-201ENST00000617467 174 ntBASIC5.39□□□□□ -1.55
RXRBP28702 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.39□□□□□ -1.55
RXRBP28702 AL669831.3-213ENST00000636676 183 ntBASIC5.39□□□□□ -1.55
RXRBP28702 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RXRBP28702 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RXRBP28702 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.39□□□□□ -1.55
RXRBP28702 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RXRBP28702 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RXRBP28702 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RXRBP28702 AL035425.3-201ENST00000564206 4996 ntBASIC5.38□□□□□ -1.55
RXRBP28702 AC005332.5-201ENST00000591222 2919 ntBASIC5.38□□□□□ -1.55
RXRBP28702 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RXRBP28702 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.38□□□□□ -1.55
RXRBP28702 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.38□□□□□ -1.55
RXRBP28702 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms