Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC090572.1-201ENST00000519251 160 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.42□□□□□ -1.86
ABCD3P28288 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.42□□□□□ -1.86
ABCD3P28288 AC098826.3-201ENST00000603823 466 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 AC104073.3-201ENST00000610942 955 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 AL121772.2-201ENST00000614331 297 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 AC073308.1-201ENST00000623696 305 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ABCD3P28288 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ABCD3P28288 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ABCD3P28288 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ABCD3P28288 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ABCD3P28288 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.42□□□□□ -1.86
ABCD3P28288 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ABCD3P28288 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ABCD3P28288 UBE2L2-201ENST00000254302 429 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ABCD3P28288 RNU6-108P-201ENST00000365558 107 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 RNU6-946P-201ENST00000383878 107 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 RNU5A-6P-201ENST00000384136 116 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 RNU6-140P-201ENST00000384566 108 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 RNU6-14P-201ENST00000384630 106 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 RN7SKP27-201ENST00000410684 333 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.41□□□□□ -1.86
ABCD3P28288 AC079448.1-201ENST00000449377 373 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.41□□□□□ -1.86
ABCD3P28288 MTCO3P20-201ENST00000454926 688 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 AC092798.1-201ENST00000458542 409 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.41□□□□□ -1.86
ABCD3P28288 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ABCD3P28288 HMGN1P11-201ENST00000508668 303 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.41□□□□□ -1.86
ABCD3P28288 SCARNA24.1-201ENST00000516465 137 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 AP000867.2-201ENST00000532468 320 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.41□□□□□ -1.86
ABCD3P28288 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.41□□□□□ -1.86
ABCD3P28288 AC034105.4-201ENST00000568304 277 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 AC006504.3-201ENST00000586818 523 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 AL161798.1-201ENST00000604630 131 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 AL136363.1-201ENST00000605349 337 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 NDUFA8P1-201ENST00000605525 367 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 AC098614.4-201ENST00000607601 462 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 AC138649.3-201ENST00000622154 254 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.41□□□□□ -1.86
ABCD3P28288 MTND5P42-201ENST00000637720 498 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 AP000553.6-201ENST00000641242 118 ntBASIC3.41□□□□□ -1.86
ABCD3P28288 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.41□□□□□ -1.86
ABCD3P28288 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ABCD3P28288 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ABCD3P28288 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ABCD3P28288 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ABCD3P28288 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
ABCD3P28288 OR5J1P-201ENST00000313544 939 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 RNU6-188P-201ENST00000364207 107 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 OR5H15-201ENST00000383696 930 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 RNU6-641P-201ENST00000384006 107 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 Y_RNA.582-201ENST00000391023 95 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 HSPE1P8-201ENST00000406997 288 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.4□□□□□ -1.87
ABCD3P28288 HMGB3P20-201ENST00000417997 600 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 ELOCP14-201ENST00000428070 331 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.4□□□□□ -1.87
ABCD3P28288 AC018644.1-201ENST00000429934 551 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.4□□□□□ -1.87
ABCD3P28288 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.4□□□□□ -1.87
ABCD3P28288 ELOCP7-201ENST00000439968 331 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.4□□□□□ -1.87
ABCD3P28288 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.4□□□□□ -1.87
ABCD3P28288 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 AC022364.2-201ENST00000457963 554 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 TPT1P7-201ENST00000458300 517 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.4□□□□□ -1.87
ABCD3P28288 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
ABCD3P28288 SAP18P1-201ENST00000512058 390 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 APOOP4-201ENST00000513530 597 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.4□□□□□ -1.87
ABCD3P28288 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.4□□□□□ -1.87
ABCD3P28288 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.4□□□□□ -1.87
ABCD3P28288 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.4□□□□□ -1.87
ABCD3P28288 AC008011.1-201ENST00000545989 227 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 AL845331.3-202ENST00000562856 261 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.4□□□□□ -1.87
ABCD3P28288 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ABCD3P28288 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.4□□□□□ -1.87
ABCD3P28288 AC034229.5-201ENST00000624258 185 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ABCD3P28288 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.4□□□□□ -1.87
ABCD3P28288 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ABCD3P28288 AC010680.1-201ENST00000590024 3590 ntBASIC3.4□□□□□ -1.87
ABCD3P28288 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
ABCD3P28288 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.39□□□□□ -1.87
ABCD3P28288 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ABCD3P28288 RNA5SP124-201ENST00000362739 110 ntBASIC3.39□□□□□ -1.87
ABCD3P28288 SNORA14A-201ENST00000364773 135 ntBASIC3.39□□□□□ -1.87
ABCD3P28288 Y_RNA.318-201ENST00000365131 97 ntBASIC3.39□□□□□ -1.87
ABCD3P28288 RNU6-190P-201ENST00000384154 102 ntBASIC3.39□□□□□ -1.87
ABCD3P28288 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.39□□□□□ -1.87
ABCD3P28288 AL139397.2-201ENST00000404529 772 ntBASIC3.39□□□□□ -1.87
ABCD3P28288 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms