Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC091167.1-201ENST00000492017 396 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.2□□□□□ -1.58
ERCC3P19447 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.2□□□□□ -1.58
ERCC3P19447 VWA8P1-201ENST00000510889 176 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.2□□□□□ -1.58
ERCC3P19447 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.2□□□□□ -1.58
ERCC3P19447 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.2□□□□□ -1.58
ERCC3P19447 MRPL49P2-201ENST00000521066 465 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.2□□□□□ -1.58
ERCC3P19447 ATP5F1P5-201ENST00000526403 760 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.2□□□□□ -1.58
ERCC3P19447 AC004024.1-201ENST00000549244 247 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.2□□□□□ -1.58
ERCC3P19447 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.2□□□□□ -1.58
ERCC3P19447 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.2□□□□□ -1.58
ERCC3P19447 MIR548AC-201ENST00000585049 88 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 uc_338.32-201ENST00000615087 172 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.2□□□□□ -1.58
ERCC3P19447 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.2□□□□□ -1.58
ERCC3P19447 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC3P19447 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC3P19447 AC008568.2-201ENST00000623862 2313 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC3P19447 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.2□□□□□ -1.58
ERCC3P19447 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC3P19447 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
ERCC3P19447 NOL8P1-201ENST00000508336 3529 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ERCC3P19447 AC139713.2-215ENST00000641428 5037 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ERCC3P19447 SNORA31-201ENST00000362607 130 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 RNU4-79P-201ENST00000362764 141 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 RNU6-1011P-201ENST00000384668 107 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 MIR301A-201ENST00000385261 86 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 RPL23AP26-201ENST00000412728 464 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC3P19447 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.19□□□□□ -1.58
ERCC3P19447 AL669831.1-202ENST00000428504 417 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 GTF2IP13-201ENST00000438487 386 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC3P19447 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC3P19447 AC233279.1-201ENST00000455300 423 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 RNU7-66P-201ENST00000459469 62 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 AC010469.1-201ENST00000463864 576 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 KC877373.1-201ENST00000479066 408 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 AC105137.1-201ENST00000484355 562 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.19□□□□□ -1.58
ERCC3P19447 RPL39P5-202ENST00000512505 151 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 RNU6-256P-201ENST00000516747 97 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 AC090151.1-201ENST00000520784 730 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 RNU6-323P-201ENST00000521915 107 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 AP000889.2-201ENST00000532684 490 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.19□□□□□ -1.58
ERCC3P19447 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.19□□□□□ -1.58
ERCC3P19447 AC025884.1-201ENST00000556034 378 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 AL161798.1-201ENST00000604630 131 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.19□□□□□ -1.58
ERCC3P19447 AC020634.1-201ENST00000608701 549 ntBASIC5.19□□□□□ -1.58
ERCC3P19447 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.19□□□□□ -1.58
ERCC3P19447 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.19□□□□□ -1.58
ERCC3P19447 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.19□□□□□ -1.58
ERCC3P19447 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
ERCC3P19447 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC3P19447 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.18□□□□□ -1.58
ERCC3P19447 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC3P19447 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.18□□□□□ -1.58
ERCC3P19447 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
ERCC3P19447 AC007685.1-201ENST00000329806 452 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 Y_RNA.167-201ENST00000363735 109 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 U3.12-201ENST00000364498 214 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 Y_RNA.460-201ENST00000384255 102 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 SNORA37-201ENST00000384504 129 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 FAT1P1-201ENST00000406588 507 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 RPLP0P7-201ENST00000416050 667 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.18□□□□□ -1.58
ERCC3P19447 AC020890.1-201ENST00000491837 504 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 DEFB109F-201ENST00000491870 277 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.18□□□□□ -1.58
ERCC3P19447 RNA5SP309-201ENST00000516670 106 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.18□□□□□ -1.58
ERCC3P19447 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.18□□□□□ -1.58
ERCC3P19447 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.18□□□□□ -1.58
ERCC3P19447 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.18□□□□□ -1.58
ERCC3P19447 MIR4790-201ENST00000577799 79 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 VN1R85P-201ENST00000601587 426 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 AC006023.2-201ENST00000609916 167 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 SNORD39.4-201ENST00000620099 78 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 AC022418.1-201ENST00000624118 445 ntBASIC5.18□□□□□ -1.58
ERCC3P19447 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.18□□□□□ -1.58
ERCC3P19447 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.18□□□□□ -1.58
ERCC3P19447 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC3P19447 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
ERCC3P19447 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC3P19447 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.18□□□□□ -1.58
ERCC3P19447 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC3P19447 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC3P19447 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ERCC3P19447 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ERCC3P19447 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.17□□□□□ -1.58
ERCC3P19447 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms