Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AL121576.1-201ENST00000556055 276 ntBASIC4.42□□□□□ -1.7
PTPN1P18031 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN1P18031 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN1P18031 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN1P18031 AC245389.1-201ENST00000605141 529 ntBASIC4.42□□□□□ -1.7
PTPN1P18031 AC012409.4-201ENST00000612923 249 ntBASIC4.42□□□□□ -1.7
PTPN1P18031 AC004696.1-201ENST00000614345 607 ntBASIC4.42□□□□□ -1.7
PTPN1P18031 AC112484.5-201ENST00000624189 228 ntBASIC4.42□□□□□ -1.7
PTPN1P18031 AC068724.3-201ENST00000625906 87 ntBASIC4.42□□□□□ -1.7
PTPN1P18031 MTND4LP32-201ENST00000636111 270 ntBASIC4.42□□□□□ -1.7
PTPN1P18031 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN1P18031 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN1P18031 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN1P18031 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN1P18031 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN1P18031 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN1P18031 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPN1P18031 Y_RNA.132-201ENST00000363421 102 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 RN7SKP227-201ENST00000364445 330 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN1P18031 EIF4E2P1-201ENST00000393781 255 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 MIR548K-201ENST00000408406 116 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 MIR548F5-201ENST00000408421 86 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 RNU2-43P-201ENST00000410306 190 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 AL356095.1-201ENST00000417217 199 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 SSXP9-201ENST00000417503 292 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 MTND2P23-201ENST00000422990 651 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 OR4C10P-201ENST00000434991 931 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 RPS3AP52-201ENST00000435639 297 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 RPL23AP89-201ENST00000439324 255 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 AL121871.1-201ENST00000443413 436 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 AL162388.1-201ENST00000450912 352 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 AC107399.1-201ENST00000451226 265 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 FABP5P13-201ENST00000452144 328 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 NIPA2P5-201ENST00000452282 464 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 RPS26P28-201ENST00000470806 348 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 RPL21P93-201ENST00000480465 489 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 TRBVA-201ENST00000498804 316 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.41□□□□□ -1.7
PTPN1P18031 Y_RNA.718-201ENST00000517110 102 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 AP005639.2-201ENST00000527592 928 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
PTPN1P18031 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPN1P18031 AL360085.1-201ENST00000604713 532 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 AL162730.1-201ENST00000605734 292 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 MIR6867-201ENST00000610636 67 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 ZYXP1-201ENST00000617638 118 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PTPN1P18031 AC007998.5-201ENST00000622938 237 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 RNA5SP196-201ENST00000625967 102 ntBASIC4.41□□□□□ -1.7
PTPN1P18031 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PTPN1P18031 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN1P18031 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PTPN1P18031 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
PTPN1P18031 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTPN1P18031 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
PTPN1P18031 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
PTPN1P18031 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.4□□□□□ -1.7
PTPN1P18031 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PTPN1P18031 Y_RNA.128-201ENST00000363391 112 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 RNA5SP130-201ENST00000364431 114 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN1P18031 RNU1-13P-201ENST00000384499 162 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 SNORD116-29-201ENST00000384516 83 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 RNU6-1127P-201ENST00000384580 107 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PTPN1P18031 AC110754.1-201ENST00000399740 601 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 MIR548P-201ENST00000408336 84 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 RNU4-14P-201ENST00000410858 122 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN1P18031 AC090774.1-201ENST00000435925 246 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 AC006011.1-201ENST00000442758 349 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPN1P18031 RPS15AP27-201ENST00000449183 343 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 FGF7P3-201ENST00000454645 303 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 VN1R105P-201ENST00000486595 910 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 RN7SL604P-201ENST00000492589 296 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN1P18031 RNU6-189P-201ENST00000516120 101 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 RNU6-123P-201ENST00000516163 102 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 RNA5SP154-201ENST00000516193 111 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.4□□□□□ -1.71
PTPN1P18031 TRMT10BP1-201ENST00000519377 943 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 AC069240.1-201ENST00000548774 375 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN1P18031 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN1P18031 LLPHP1-201ENST00000603571 367 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 AL138889.2-201ENST00000603883 242 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 IGHV3-29-201ENST00000604817 344 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 AL670379.4-201ENST00000605279 254 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 AC084781.2-201ENST00000615568 161 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 AC099669.2-201ENST00000616549 437 ntBASIC4.4□□□□□ -1.71
PTPN1P18031 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PTPN1P18031 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN1P18031 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN1P18031 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
PTPN1P18031 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
PTPN1P18031 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPN1P18031 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN1P18031 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms