Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC004067.1-201ENST00000608733 700 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DOBP13765 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DOBP13765 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DOBP13765 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DOBP13765 EXOC5P1-201ENST00000510543 1969 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 OTUD4P1-201ENST00000237841 3067 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC009812.4-201ENST00000569134 1805 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DOBP13765 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 RNU6-173P-201ENST00000364215 104 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 SNORA7.2-201ENST00000364446 145 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 Y_RNA.295-201ENST00000364918 102 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 RNU1-64P-201ENST00000365443 163 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 RNU4-48P-201ENST00000365559 182 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DOBP13765 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DOBP13765 RNU6-76P-201ENST00000384060 104 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 MIR454-201ENST00000390180 115 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC068050.1-201ENST00000394891 380 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC110754.1-201ENST00000399740 601 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 RN7SKP202-201ENST00000410439 330 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 RNU2-39P-201ENST00000410604 198 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 RN7SKP53-201ENST00000411337 315 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 RAB9AP3-201ENST00000412737 573 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 MTCO1P39-201ENST00000426148 480 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 MTATP6P4-201ENST00000427725 675 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 BNIP3P2-201ENST00000441221 577 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 NFU1P2-201ENST00000448700 469 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 RAB9AP1-201ENST00000449393 573 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC126389.1-201ENST00000477436 290 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC078817.1-201ENST00000492623 435 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 VN1R104P-201ENST00000505115 1009 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 MLLT10P2-201ENST00000506434 249 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 KLHL2P1-201ENST00000508691 521 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 SNORA40.12-201ENST00000516329 111 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 RNU1-95P-201ENST00000516357 160 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 RNU1-128P-201ENST00000516704 160 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 RNU6-1092P-201ENST00000516955 87 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 RNU1-45P-201ENST00000517191 141 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 MTND1P35-201ENST00000526739 508 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC118273.2-201ENST00000532092 465 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC093012.1-202ENST00000549403 582 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AL670379.6-201ENST00000603753 252 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AL670379.11-201ENST00000604059 253 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC008162.1-201ENST00000604718 254 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AL670379.1-201ENST00000604752 252 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AL670379.5-201ENST00000605253 252 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AL670379.12-201ENST00000605291 253 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AL670379.8-201ENST00000605353 252 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC012443.1-201ENST00000605605 231 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AL670379.7-201ENST00000605823 252 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 AL360181.4-201ENST00000621752 134 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 FER-210ENST00000628534 558 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DOBP13765 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DOBP13765 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DOBP13765 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 AC068647.1-201ENST00000489539 2265 ntBASIC3.17□□□□□ -1.9
HLA-DOBP13765 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DOBP13765 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DOBP13765 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DOBP13765 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DOBP13765 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DOBP13765 GABPAP-201ENST00000419271 1356 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DOBP13765 AL137003.2-201ENST00000606924 2538 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 FRG1CP-201ENST00000358464 769 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 Y_RNA.88-201ENST00000363029 99 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 RNU6-960P-201ENST00000364056 120 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DOBP13765 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DOBP13765 RNU6-877P-201ENST00000383868 107 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 RNU6-641P-201ENST00000384006 107 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 RNU6-1158P-201ENST00000391167 107 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 AL136116.1-201ENST00000403591 381 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 AL445189.1-201ENST00000405722 338 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 TXNP7-201ENST00000406296 293 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 RNU6-908P-201ENST00000410160 94 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 Y_RNA.604-201ENST00000410574 102 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 AC022028.1-201ENST00000412054 408 ntBASIC3.16□□□□□ -1.9
HLA-DOBP13765 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DOBP13765 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms