Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2□□□□□ -2.09
HLA-AP01891 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-AP01891 RNU5F-8P-201ENST00000515941 111 ntBASIC2□□□□□ -2.09
HLA-AP01891 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2□□□□□ -2.09
HLA-AP01891 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2□□□□□ -2.09
HLA-AP01891 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2□□□□□ -2.09
HLA-AP01891 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2□□□□□ -2.09
HLA-AP01891 HSPE1P3-201ENST00000559254 309 ntBASIC2□□□□□ -2.09
HLA-AP01891 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2□□□□□ -2.09
HLA-AP01891 RPL23AP84-201ENST00000571193 464 ntBASIC2□□□□□ -2.09
HLA-AP01891 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2□□□□□ -2.09
HLA-AP01891 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2□□□□□ -2.09
HLA-AP01891 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2□□□□□ -2.09
HLA-AP01891 AL161729.4-201ENST00000604650 476 ntBASIC2□□□□□ -2.09
HLA-AP01891 MTND4LP5-201ENST00000605152 292 ntBASIC2□□□□□ -2.09
HLA-AP01891 AC067747.1-201ENST00000608026 250 ntBASIC2□□□□□ -2.09
HLA-AP01891 UBE2Q2P6-201ENST00000612666 153 ntBASIC2□□□□□ -2.09
HLA-AP01891 AL590099.1-201ENST00000615276 138 ntBASIC2□□□□□ -2.09
HLA-AP01891 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2□□□□□ -2.09
HLA-AP01891 AL512427.1-201ENST00000618593 349 ntBASIC2□□□□□ -2.09
HLA-AP01891 AC253576.2-201ENST00000618815 580 ntBASIC2□□□□□ -2.09
HLA-AP01891 MIR203B-201ENST00000636080 86 ntBASIC2□□□□□ -2.09
HLA-AP01891 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2□□□□□ -2.09
HLA-AP01891 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
HLA-AP01891 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2□□□□□ -2.09
HLA-AP01891 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2□□□□□ -2.09
HLA-AP01891 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-AP01891 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-AP01891 AC097714.1-201ENST00000511272 1647 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-AP01891 AL596028.1-201ENST00000326971 197 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-AP01891 RNU6-217P-201ENST00000384164 104 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 Y_RNA.548-201ENST00000384656 105 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 RNU2-49P-201ENST00000410666 184 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 RNU6-1328P-201ENST00000410938 106 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 AL592310.1-201ENST00000414330 671 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-AP01891 HMGB1P49-201ENST00000418882 569 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-AP01891 AC063976.3-201ENST00000426849 329 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 WARS2P1-201ENST00000429678 537 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-AP01891 RPS15AP5-201ENST00000436276 388 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 PGBD4P3-201ENST00000440731 581 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-AP01891 LINC00888-204ENST00000487386 421 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HLA-AP01891 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-AP01891 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.99□□□□□ -2.09
HLA-AP01891 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HLA-AP01891 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-AP01891 AC068313.1-201ENST00000604028 1008 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 AC025588.2-201ENST00000604851 466 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-AP01891 MIR6130-201ENST00000619419 109 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 AC109454.4-201ENST00000623411 649 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 AC092608.2-201ENST00000624427 218 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-AP01891 AP005901.5-201ENST00000545779 1796 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
HLA-AP01891 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-AP01891 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-AP01891 AC010329.5-201ENST00000623497 2174 ntBASIC1.99□□□□□ -2.09
HLA-AP01891 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-AP01891 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-AP01891 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-AP01891 MTCO1P9-201ENST00000505577 1534 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-AP01891 AC062016.1-201ENST00000355719 319 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 RNU6-741P-201ENST00000383889 107 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 Y_RNA.578-201ENST00000390903 88 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 AL139039.1-201ENST00000401900 692 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 AC023141.4-201ENST00000412031 328 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 AL139421.1-201ENST00000423010 169 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-AP01891 AC019097.1-201ENST00000424783 735 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 AC008850.1-201ENST00000427546 362 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-AP01891 CBWD4P-201ENST00000445695 655 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 MTATP6P7-201ENST00000453315 681 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-AP01891 RPL36AP51-201ENST00000487216 318 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 HMGB1P28-201ENST00000507778 552 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-AP01891 AC022447.1-201ENST00000515358 464 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 RNU1-103P-201ENST00000516502 125 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-AP01891 AP005902.1-201ENST00000521358 186 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-AP01891 DEFB130C-202ENST00000530001 230 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
HLA-AP01891 AC121758.2-201ENST00000553271 193 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.98□□□□□ -2.09
HLA-AP01891 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-AP01891 AL390208.1-201ENST00000605885 644 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 AC243773.3-201ENST00000613270 256 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 AP000943.4-201ENST00000622912 357 ntBASIC1.98□□□□□ -2.09
HLA-AP01891 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms