Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CBX3P6-201ENST00000430257 527 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.24□□□□□ -1.73
CNOT4O95628 AC234775.1-201ENST00000454247 670 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AL356981.1-201ENST00000454879 684 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AC005008.1-201ENST00000456151 612 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 HMGN2P7-201ENST00000456186 273 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 SCARNA18-201ENST00000459004 134 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.24□□□□□ -1.73
CNOT4O95628 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.24□□□□□ -1.73
CNOT4O95628 HMGB1P22-201ENST00000505315 124 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AC008526.1-201ENST00000509149 338 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AC108078.2-201ENST00000510750 236 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 SNORA25.10-201ENST00000515926 124 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 RN7SKP276-201ENST00000516242 268 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 RNU6-709P-201ENST00000517257 104 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 RN7SKP92-201ENST00000517266 244 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AC009643.1-201ENST00000532030 391 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AL049839.1-201ENST00000556151 657 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.24□□□□□ -1.73
CNOT4O95628 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.24□□□□□ -1.73
CNOT4O95628 MIR5699-201ENST00000578903 90 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 MIR3690-201ENST00000580266 75 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CNOT4O95628 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AL138726.1-201ENST00000614873 333 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AC010378.1-201ENST00000619270 362 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 AL445363.3-201ENST00000623080 671 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 Z69720.2-201ENST00000624755 279 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CNOT4O95628 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CNOT4O95628 AF127577.6-201ENST00000623352 2191 ntBASIC4.24□□□□□ -1.73
CNOT4O95628 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CNOT4O95628 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.24□□□□□ -1.73
CNOT4O95628 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.24□□□□□ -1.73
CNOT4O95628 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CNOT4O95628 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
CNOT4O95628 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNOT4O95628 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CNOT4O95628 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNOT4O95628 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNOT4O95628 AC103710.2-202ENST00000641454 2853 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.23□□□□□ -1.73
CNOT4O95628 RNU6-702P-201ENST00000364982 107 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 Y_RNA.557-201ENST00000384680 107 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 RNU11-4P-201ENST00000391149 133 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AL391417.1-201ENST00000404100 426 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 RNA5SP129-201ENST00000410276 118 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AC009310.1-201ENST00000414414 451 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.23□□□□□ -1.73
CNOT4O95628 RPL7P10-201ENST00000417407 739 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 CALM2P2-201ENST00000428512 440 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.23□□□□□ -1.73
CNOT4O95628 SNAP23P1-201ENST00000433229 246 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AC005154.2-201ENST00000438110 379 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 CYCSP43-201ENST00000438233 310 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.23□□□□□ -1.73
CNOT4O95628 RPL21P23-201ENST00000446654 460 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 RPS15AP27-201ENST00000449183 343 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.23□□□□□ -1.73
CNOT4O95628 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.23□□□□□ -1.73
CNOT4O95628 AC103987.1-201ENST00000473394 348 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AC135721.1-201ENST00000497954 479 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 NDUFB4P9-201ENST00000511646 388 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 RNU6-1016P-201ENST00000516689 94 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AP001880.2-201ENST00000538233 448 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.23□□□□□ -1.73
CNOT4O95628 AC133555.2-201ENST00000550213 292 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.23□□□□□ -1.73
CNOT4O95628 AC136624.4-201ENST00000573044 370 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.23□□□□□ -1.73
CNOT4O95628 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.23□□□□□ -1.73
CNOT4O95628 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.23□□□□□ -1.73
CNOT4O95628 AL442067.1-201ENST00000613261 223 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AL355365.1-201ENST00000616480 294 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AL161637.1-201ENST00000622380 412 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CNOT4O95628 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CNOT4O95628 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNOT4O95628 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNOT4O95628 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CNOT4O95628 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNOT4O95628 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.23□□□□□ -1.73
CNOT4O95628 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNOT4O95628 DHX9P1-201ENST00000436565 3076 ntBASIC4.23□□□□□ -1.73
CNOT4O95628 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.22□□□□□ -1.73
CNOT4O95628 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.22□□□□□ -1.73
CNOT4O95628 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.22□□□□□ -1.73
CNOT4O95628 AC009643.2-201ENST00000603543 1448 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AC006971.1-201ENST00000407916 4486 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.22□□□□□ -1.73
CNOT4O95628 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CNOT4O95628 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CNOT4O95628 Y_RNA.47-201ENST00000362697 108 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 RNU6-173P-201ENST00000364215 104 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 Y_RNA.364-201ENST00000365532 101 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 AC068538.1-201ENST00000376856 336 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 SNORA75B-201ENST00000384053 137 ntBASIC4.22□□□□□ -1.73
CNOT4O95628 RNU6-890P-201ENST00000384121 107 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms