Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.63□□□□□ -1.99
HCN1O60741 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.63□□□□□ -1.99
HCN1O60741 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.63□□□□□ -1.99
HCN1O60741 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
HCN1O60741 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.63□□□□□ -1.99
HCN1O60741 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.63□□□□□ -1.99
HCN1O60741 AC015871.2-201ENST00000603605 948 ntBASIC2.63□□□□□ -1.99
HCN1O60741 AC034229.4-201ENST00000607861 441 ntBASIC2.63□□□□□ -1.99
HCN1O60741 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
HCN1O60741 AL356596.1-201ENST00000624230 379 ntBASIC2.63□□□□□ -1.99
HCN1O60741 TPTE2P4-201ENST00000258589 1605 ntBASIC2.63□□□□□ -1.99
HCN1O60741 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HCN1O60741 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HCN1O60741 AC005832.2-201ENST00000538921 1430 ntBASIC2.62□□□□□ -1.99
HCN1O60741 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.62□□□□□ -1.99
HCN1O60741 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HCN1O60741 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HCN1O60741 RNU6-433P-201ENST00000363216 104 ntBASIC2.62□□□□□ -1.99
HCN1O60741 RNU6-853P-201ENST00000364306 107 ntBASIC2.62□□□□□ -1.99
HCN1O60741 RNU6-637P-201ENST00000384050 107 ntBASIC2.62□□□□□ -1.99
HCN1O60741 MIR627-201ENST00000384979 97 ntBASIC2.62□□□□□ -1.99
HCN1O60741 RSL24D1P4-201ENST00000400938 484 ntBASIC2.62□□□□□ -1.99
HCN1O60741 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.62□□□□□ -1.99
HCN1O60741 AC018630.2-202ENST00000422992 927 ntBASIC2.62□□□□□ -1.99
HCN1O60741 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.62□□□□□ -1.99
HCN1O60741 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.62□□□□□ -1.99
HCN1O60741 RSU1P2-202ENST00000437884 485 ntBASIC2.62□□□□□ -1.99
HCN1O60741 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.62□□□□□ -1.99
HCN1O60741 AIG1P1-201ENST00000503376 148 ntBASIC2.62□□□□□ -1.99
HCN1O60741 HIGD1AP13-201ENST00000509878 289 ntBASIC2.62□□□□□ -1.99
HCN1O60741 AC091826.1-201ENST00000514065 313 ntBASIC2.62□□□□□ -1.99
HCN1O60741 SNORA31.21-201ENST00000517180 77 ntBASIC2.62□□□□□ -1.99
HCN1O60741 MRPS36P3-201ENST00000519284 130 ntBASIC2.62□□□□□ -1.99
HCN1O60741 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.62□□□□□ -1.99
HCN1O60741 AC004486.1-201ENST00000546846 233 ntBASIC2.62□□□□□ -1.99
HCN1O60741 AC009097.3-201ENST00000563557 1018 ntBASIC2.62□□□□□ -1.99
HCN1O60741 MIR3670-2-201ENST00000582974 65 ntBASIC2.62□□□□□ -1.99
HCN1O60741 MIR3670-1-201ENST00000584160 65 ntBASIC2.62□□□□□ -1.99
HCN1O60741 MIR3670-3-201ENST00000584855 65 ntBASIC2.62□□□□□ -1.99
HCN1O60741 UBE2L4-201ENST00000587688 464 ntBASIC2.62□□□□□ -1.99
HCN1O60741 AC022022.2-201ENST00000602989 360 ntBASIC2.62□□□□□ -1.99
HCN1O60741 AC024153.1-201ENST00000603103 365 ntBASIC2.62□□□□□ -1.99
HCN1O60741 AC068313.1-201ENST00000604028 1008 ntBASIC2.62□□□□□ -1.99
HCN1O60741 AP000787.2-201ENST00000604432 568 ntBASIC2.62□□□□□ -1.99
HCN1O60741 AC024560.3-201ENST00000608482 349 ntBASIC2.62□□□□□ -1.99
HCN1O60741 AL161734.1-201ENST00000609720 557 ntBASIC2.62□□□□□ -1.99
HCN1O60741 TUSC7.1-201ENST00000610969 165 ntBASIC2.62□□□□□ -1.99
HCN1O60741 MIR3670-4-201ENST00000612260 65 ntBASIC2.62□□□□□ -1.99
HCN1O60741 AL158801.5-201ENST00000623123 465 ntBASIC2.62□□□□□ -1.99
HCN1O60741 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.62□□□□□ -1.99
HCN1O60741 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.62□□□□□ -1.99
HCN1O60741 OR4G2P-202ENST00000641004 1759 ntBASIC2.61□□□□□ -1.99
HCN1O60741 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HCN1O60741 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
HCN1O60741 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HCN1O60741 SNORD113-6-201ENST00000363345 75 ntBASIC2.61□□□□□ -1.99
HCN1O60741 RNU6-931P-201ENST00000363850 107 ntBASIC2.61□□□□□ -1.99
HCN1O60741 RNU6-723P-201ENST00000383973 107 ntBASIC2.61□□□□□ -1.99
HCN1O60741 MIR181A2-201ENST00000384863 110 ntBASIC2.61□□□□□ -1.99
HCN1O60741 MIR592-201ENST00000384959 97 ntBASIC2.61□□□□□ -1.99
HCN1O60741 MIR514A1-201ENST00000385133 98 ntBASIC2.61□□□□□ -1.99
HCN1O60741 HIGD1AP15-201ENST00000416198 280 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.61□□□□□ -1.99
HCN1O60741 XKRYP1-201ENST00000423438 492 ntBASIC2.61□□□□□ -1.99
HCN1O60741 RPL7P37-201ENST00000425095 738 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AL445669.1-201ENST00000426743 755 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.61□□□□□ -1.99
HCN1O60741 RPL7L1P10-201ENST00000427790 463 ntBASIC2.61□□□□□ -1.99
HCN1O60741 XKRYP2-201ENST00000432915 492 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AC105272.1-201ENST00000438604 198 ntBASIC2.61□□□□□ -1.99
HCN1O60741 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.61□□□□□ -1.99
HCN1O60741 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.61□□□□□ -1.99
HCN1O60741 RPL23AP35-201ENST00000451906 501 ntBASIC2.61□□□□□ -1.99
HCN1O60741 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.61□□□□□ -1.99
HCN1O60741 AC117522.3-201ENST00000507974 584 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AC093809.1-201ENST00000509155 340 ntBASIC2.61□□□□□ -1.99
HCN1O60741 TTC39CP1-201ENST00000512513 755 ntBASIC2.61□□□□□ -1.99
HCN1O60741 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.61□□□□□ -1.99
HCN1O60741 RNA5SP216-201ENST00000516111 123 ntBASIC2.61□□□□□ -1.99
HCN1O60741 SNORA9.3-201ENST00000516383 129 ntBASIC2.61□□□□□ -1.99
HCN1O60741 RPPH1-2P-201ENST00000516688 293 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.61□□□□□ -1.99
HCN1O60741 GTF3AP2-201ENST00000557014 266 ntBASIC2.61□□□□□ -1.99
HCN1O60741 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.61□□□□□ -1.99
HCN1O60741 AL354943.1-201ENST00000572103 781 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AC005951.2-201ENST00000576282 495 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.61□□□□□ -1.99
HCN1O60741 AC013553.2-201ENST00000604244 589 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AL035413.2-201ENST00000604801 525 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AL136363.1-201ENST00000605349 337 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AL607023.1-201ENST00000620045 248 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.61□□□□□ -1.99
HCN1O60741 AC099063.3-201ENST00000642066 185 ntBASIC2.61□□□□□ -1.99
HCN1O60741 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
HCN1O60741 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.61□□□□□ -1.99
HCN1O60741 AC008669.1-201ENST00000565823 2178 ntBASIC2.61□□□□□ -1.99
HCN1O60741 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.61□□□□□ -1.99
HCN1O60741 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HCN1O60741 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HCN1O60741 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms