Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTNND1O60716 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.22□□□□□ -1.73
CTNND1O60716 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTNND1O60716 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTNND1O60716 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTNND1O60716 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.21□□□□□ -1.73
CTNND1O60716 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CTNND1O60716 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.21□□□□□ -1.73
CTNND1O60716 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTNND1O60716 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CTNND1O60716 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTNND1O60716 RNU6-39P-201ENST00000384344 107 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 MIR558-201ENST00000384920 94 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 MIR181A1-201ENST00000385026 110 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 MTCO3P40-201ENST00000392516 676 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CTNND1O60716 RNA5SP129-201ENST00000410276 118 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 Z92545.1-201ENST00000411782 234 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNND1O60716 UBE2V1P10-201ENST00000414685 269 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 DBIP2-201ENST00000419076 262 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 DPPA2P1-201ENST00000428060 556 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 AC005326.1-201ENST00000429197 123 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 ATP5HP2-201ENST00000433885 485 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 USP9YP28-201ENST00000435142 589 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNND1O60716 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNND1O60716 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNND1O60716 AC093899.1-201ENST00000457984 376 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.21□□□□□ -1.74
CTNND1O60716 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNND1O60716 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CTNND1O60716 AL359273.1-201ENST00000510918 627 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.21□□□□□ -1.74
CTNND1O60716 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.21□□□□□ -1.74
CTNND1O60716 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.21□□□□□ -1.74
CTNND1O60716 RNU2-27P-201ENST00000516185 142 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 HMGB1P41-201ENST00000520234 440 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNND1O60716 SUB1P2-201ENST00000556401 297 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 RPL23AP84-201ENST00000571193 464 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNND1O60716 AC011471.1-201ENST00000585766 187 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 AP002360.4-201ENST00000606980 481 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 U4.5-201ENST00000617137 123 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.21□□□□□ -1.74
CTNND1O60716 GABPAP-201ENST00000419271 1356 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CTNND1O60716 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTNND1O60716 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.21□□□□□ -1.74
CTNND1O60716 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CTNND1O60716 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.21□□□□□ -1.74
CTNND1O60716 NCAPGP1-201ENST00000505112 1814 ntBASIC4.21□□□□□ -1.74
CTNND1O60716 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.2□□□□□ -1.74
CTNND1O60716 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTNND1O60716 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTNND1O60716 AC073343.1-201ENST00000328239 651 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTNND1O60716 RNU6-50P-201ENST00000362356 103 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 RNU4-35P-201ENST00000362588 141 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 RNU6-960P-201ENST00000364056 120 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 NDUFB4P4-201ENST00000404822 243 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 MTHFD2P2-201ENST00000407725 247 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.2□□□□□ -1.74
CTNND1O60716 HMGB3P20-201ENST00000417997 600 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.2□□□□□ -1.74
CTNND1O60716 ISCA1P1-201ENST00000426679 387 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTNND1O60716 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.2□□□□□ -1.74
CTNND1O60716 AC022364.2-201ENST00000457963 554 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 U3.44-201ENST00000458938 192 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 RPL21P104-201ENST00000464143 478 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 AC025518.1-201ENST00000479856 347 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 AC079382.1-201ENST00000493346 557 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 BTF3L4P4-201ENST00000506381 449 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.2□□□□□ -1.74
CTNND1O60716 RNA5SP468-201ENST00000516782 93 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 RNU6-410P-201ENST00000517006 107 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 RN7SKP289-201ENST00000517244 295 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.2□□□□□ -1.74
CTNND1O60716 OR5G4P-201ENST00000525251 760 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTNND1O60716 TPRKBP2-201ENST00000565969 475 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.2□□□□□ -1.74
CTNND1O60716 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.2□□□□□ -1.74
CTNND1O60716 AC107304.1-201ENST00000604229 296 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 AC092794.1-201ENST00000612734 582 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 CR381653.2-201ENST00000624041 768 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTNND1O60716 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.2□□□□□ -1.74
CTNND1O60716 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTNND1O60716 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTNND1O60716 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
CTNND1O60716 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTNND1O60716 EXOC5P1-201ENST00000510543 1969 ntBASIC4.2□□□□□ -1.74
CTNND1O60716 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTNND1O60716 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.19□□□□□ -1.74
CTNND1O60716 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTNND1O60716 SNORD17-201ENST00000390930 237 ntBASIC4.19□□□□□ -1.74
CTNND1O60716 HSPE1P26-201ENST00000405341 275 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms