Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MIR3936-201ENST00000584304 110 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AC006504.6-201ENST00000590142 199 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AC067852.4-201ENST00000590314 478 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
GRIN3BO60391 AL669831.4-202ENST00000590817 238 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AL670379.6-201ENST00000603753 252 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 SNRPGP17-201ENST00000603780 214 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AL670379.11-201ENST00000604059 253 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AC008162.1-201ENST00000604718 254 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AL670379.1-201ENST00000604752 252 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AL670379.5-201ENST00000605253 252 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AL670379.12-201ENST00000605291 253 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AC010680.4-201ENST00000605334 543 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AL670379.8-201ENST00000605353 252 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 AL670379.7-201ENST00000605823 252 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 SNHG22-203ENST00000617833 660 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 MIR6130-201ENST00000619419 109 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GRIN3BO60391 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
GRIN3BO60391 TPTE2P4-201ENST00000258589 1605 ntBASIC5.12□□□□□ -1.59
GRIN3BO60391 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
GRIN3BO60391 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GRIN3BO60391 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GRIN3BO60391 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.11□□□□□ -1.59
GRIN3BO60391 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
GRIN3BO60391 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.11□□□□□ -1.59
GRIN3BO60391 RNU6-1287P-201ENST00000362914 107 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GRIN3BO60391 RNU6-1060P-201ENST00000384664 107 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 AL592291.1-201ENST00000403830 352 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 HSPE1P12-201ENST00000412576 301 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 RPL36AP10-201ENST00000421785 322 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 AL158156.1-201ENST00000422509 473 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 CALM2P2-201ENST00000428512 440 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 RPL23AP33-201ENST00000442301 452 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 AL583843.1-201ENST00000456070 346 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 BX510359.1-201ENST00000456973 237 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 Y_RNA.631-201ENST00000459607 101 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 RN7SL432P-201ENST00000484057 298 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.11□□□□□ -1.59
GRIN3BO60391 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.11□□□□□ -1.59
GRIN3BO60391 HMGN1P11-201ENST00000508668 303 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.11□□□□□ -1.59
GRIN3BO60391 RN7SKP234-201ENST00000517173 224 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.11□□□□□ -1.59
GRIN3BO60391 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.11□□□□□ -1.59
GRIN3BO60391 PTP4A1P6-201ENST00000531034 478 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 MIR3942-201ENST00000585264 109 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 APOOP1-201ENST00000604695 592 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 AL355802.3-201ENST00000607571 545 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 MIR7151-201ENST00000617477 60 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.11□□□□□ -1.59
GRIN3BO60391 MTCO1P24-201ENST00000515438 1558 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 ASNSP1-201ENST00000518311 1939 ntBASIC5.11□□□□□ -1.59
GRIN3BO60391 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.11□□□□□ -1.59
GRIN3BO60391 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
GRIN3BO60391 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GRIN3BO60391 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GRIN3BO60391 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GRIN3BO60391 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.1□□□□□ -1.59
GRIN3BO60391 AL031595.2-201ENST00000624215 19071 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
GRIN3BO60391 RN7SKP44-201ENST00000363602 316 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 Y_RNA.212-201ENST00000364177 102 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 RNA5SP267-201ENST00000364893 126 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 RNU6-474P-201ENST00000384243 107 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 RNU6-463P-201ENST00000384340 107 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 Y_RNA.493-201ENST00000384422 102 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.1□□□□□ -1.59
GRIN3BO60391 RNY4P36-201ENST00000391116 96 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GRIN3BO60391 AL080315.1-201ENST00000406055 466 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 RPL21P24-201ENST00000413752 448 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 RAC1P6-201ENST00000423911 575 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 MTND4P1-201ENST00000457501 1466 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 AL445433.1-201ENST00000457507 257 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 AC106707.2-201ENST00000484182 374 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 HMGB3P15-201ENST00000507326 574 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 AC104806.1-201ENST00000508720 308 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 AC005741.1-201ENST00000511094 432 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.1□□□□□ -1.59
GRIN3BO60391 AC010653.1-201ENST00000571108 881 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 MIR5583-1-201ENST00000580941 59 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 AC006006.1-201ENST00000603082 144 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 AC005344.1-201ENST00000613391 459 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 PRO1804-201ENST00000623780 2050 ntBASIC5.1□□□□□ -1.59
GRIN3BO60391 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
GRIN3BO60391 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GRIN3BO60391 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GRIN3BO60391 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
GRIN3BO60391 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
GRIN3BO60391 DDX10P1-201ENST00000448545 1933 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
GRIN3BO60391 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.09□□□□□ -1.59
GRIN3BO60391 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
GRIN3BO60391 UBE2V1P2-201ENST00000397758 440 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 RPL5P18-201ENST00000406671 891 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 RN7SKP158-201ENST00000410453 326 ntBASIC5.09□□□□□ -1.59
GRIN3BO60391 RN7SKP284-201ENST00000411002 343 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms