Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ACTN4O43707 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.93□□□□□ -1.46
ACTN4O43707 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ACTN4O43707 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ACTN4O43707 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.93□□□□□ -1.46
ACTN4O43707 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ACTN4O43707 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ACTN4O43707 PABPC1P6-201ENST00000445594 1829 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ACTN4O43707 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.92□□□□□ -1.46
ACTN4O43707 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
ACTN4O43707 AP005432.1-201ENST00000580891 3485 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ACTN4O43707 RNA5SP319-201ENST00000362768 119 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 RN7SKP124-201ENST00000364730 341 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 RNU6-926P-201ENST00000384075 107 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
ACTN4O43707 MIR1282-201ENST00000408865 101 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 RNU5E-9P-201ENST00000411164 104 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.92□□□□□ -1.46
ACTN4O43707 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.92□□□□□ -1.46
ACTN4O43707 AL451062.2-201ENST00000427515 271 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 AC005002.2-201ENST00000438228 269 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.92□□□□□ -1.46
ACTN4O43707 AL356981.1-201ENST00000454879 684 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 RPS26P21-201ENST00000475397 348 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 RN7SL273P-201ENST00000481561 299 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 AC012158.1-204ENST00000483430 465 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 AC022493.1-201ENST00000492984 337 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.92□□□□□ -1.46
ACTN4O43707 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.92□□□□□ -1.46
ACTN4O43707 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.92□□□□□ -1.46
ACTN4O43707 TRAV37-201ENST00000553906 342 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.92□□□□□ -1.46
ACTN4O43707 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.92□□□□□ -1.46
ACTN4O43707 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.92□□□□□ -1.46
ACTN4O43707 AC073349.3-201ENST00000617616 186 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 AC127024.6-201ENST00000621598 424 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 AC138965.3-201ENST00000623875 498 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 Z99571.1-201ENST00000636677 394 ntBASIC5.92□□□□□ -1.46
ACTN4O43707 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.92□□□□□ -1.46
ACTN4O43707 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ACTN4O43707 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ACTN4O43707 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.92□□□□□ -1.46
ACTN4O43707 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ACTN4O43707 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
ACTN4O43707 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ACTN4O43707 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.92□□□□□ -1.46
ACTN4O43707 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.91□□□□□ -1.46
ACTN4O43707 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ACTN4O43707 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.91□□□□□ -1.46
ACTN4O43707 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ACTN4O43707 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ACTN4O43707 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ACTN4O43707 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ACTN4O43707 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.91□□□□□ -1.46
ACTN4O43707 RNU6-1289P-201ENST00000384431 106 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 RNU6-21P-201ENST00000384710 107 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 RNA5SP339-201ENST00000390987 122 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 RPL21P67-201ENST00000402896 478 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 RN7SKP286-201ENST00000410894 299 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 AL161636.2-201ENST00000445179 927 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 MRPL48P1-201ENST00000445390 636 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 TPT1P12-201ENST00000448968 492 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.91□□□□□ -1.46
ACTN4O43707 AC007395.1-201ENST00000451333 677 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 RN7SL51P-201ENST00000468230 285 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 AC100832.1-201ENST00000471945 383 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 AP001025.1-201ENST00000486139 332 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 RN7SL184P-201ENST00000488308 297 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 SUMO2P6-201ENST00000505273 288 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.91□□□□□ -1.46
ACTN4O43707 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.91□□□□□ -1.46
ACTN4O43707 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.91□□□□□ -1.46
ACTN4O43707 AC103996.1-201ENST00000555468 102 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 RPL10P14-201ENST00000565265 298 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 RN7SL708P-201ENST00000580952 299 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.91□□□□□ -1.46
ACTN4O43707 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.91□□□□□ -1.46
ACTN4O43707 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ACTN4O43707 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 AC084757.4-201ENST00000616350 526 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ACTN4O43707 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ACTN4O43707 AL109809.4-201ENST00000603520 2185 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 AC100821.1-201ENST00000523153 2479 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ACTN4O43707 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.91□□□□□ -1.46
ACTN4O43707 ZNF826P-207ENST00000622273 1910 ntBASIC5.91□□□□□ -1.46
ACTN4O43707 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
ACTN4O43707 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.91□□□□□ -1.46
ACTN4O43707 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.91□□□□□ -1.46
ACTN4O43707 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ACTN4O43707 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ACTN4O43707 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ACTN4O43707 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ACTN4O43707 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms