Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
FOXN3O00409 MIR558-201ENST00000384920 94 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
FOXN3O00409 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
FOXN3O00409 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
FOXN3O00409 RNU6-780P-201ENST00000391030 104 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 CALM2P3-201ENST00000400429 449 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 AL391417.1-201ENST00000404100 426 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 AL590002.1-201ENST00000406554 418 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 RNU2-39P-201ENST00000410604 198 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXN3O00409 YPEL5P1-201ENST00000419731 367 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.98□□□□□ -1.77
FOXN3O00409 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXN3O00409 TIMM9P3-201ENST00000428659 274 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 RPS20P5-201ENST00000434808 360 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 RPS15AP9-201ENST00000439856 381 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 FABP5P13-201ENST00000452144 328 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 RN7SL330P-201ENST00000469709 307 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXN3O00409 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.98□□□□□ -1.77
FOXN3O00409 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.98□□□□□ -1.77
FOXN3O00409 SAP18P1-201ENST00000512058 390 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 MIR2114-201ENST00000516645 80 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.98□□□□□ -1.77
FOXN3O00409 AC087499.8-201ENST00000578406 226 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 MIR4286-201ENST00000580651 93 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXN3O00409 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXN3O00409 AC025449.1-201ENST00000603896 529 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.98□□□□□ -1.77
FOXN3O00409 AC139792.3-201ENST00000623525 224 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 AC009161.2-201ENST00000624626 138 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 AC244205.2-202ENST00000635781 342 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXN3O00409 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXN3O00409 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXN3O00409 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXN3O00409 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
FOXN3O00409 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.98□□□□□ -1.77
FOXN3O00409 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXN3O00409 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FOXN3O00409 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXN3O00409 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
FOXN3O00409 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 Y_RNA.159-201ENST00000363674 87 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
FOXN3O00409 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXN3O00409 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.97□□□□□ -1.77
FOXN3O00409 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXN3O00409 MTATP6P18-201ENST00000417994 673 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXN3O00409 AL591419.1-201ENST00000427423 339 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 MTCO2P19-201ENST00000427513 598 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXN3O00409 NEFMP1-201ENST00000443423 1006 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXN3O00409 U3.44-201ENST00000458938 192 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 RPS23P3-201ENST00000470993 430 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AC009646.1-201ENST00000510455 318 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXN3O00409 Y_RNA.704-201ENST00000516851 102 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXN3O00409 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.97□□□□□ -1.77
FOXN3O00409 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXN3O00409 AL121576.1-201ENST00000556055 276 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 MIR3921-201ENST00000577308 85 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AP001029.3-201ENST00000588063 596 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AL670379.6-201ENST00000603753 252 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AL670379.11-201ENST00000604059 253 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AC008162.1-201ENST00000604718 254 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AL670379.1-201ENST00000604752 252 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AL670379.5-201ENST00000605253 252 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AL670379.12-201ENST00000605291 253 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AL670379.8-201ENST00000605353 252 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 LARP7P1-201ENST00000605576 316 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AL670379.7-201ENST00000605823 252 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AC092954.2-201ENST00000609103 430 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AC068831.8-201ENST00000620171 435 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 AL356321.1-201ENST00000621360 228 ntBASIC3.97□□□□□ -1.77
FOXN3O00409 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXN3O00409 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
FOXN3O00409 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN3O00409 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
FOXN3O00409 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
FOXN3O00409 AL353746.1-201ENST00000566293 6881 ntBASIC3.96□□□□□ -1.77
FOXN3O00409 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
FOXN3O00409 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
FOXN3O00409 AC073343.1-201ENST00000328239 651 ntBASIC3.96□□□□□ -1.78
FOXN3O00409 Y_RNA.88-201ENST00000363029 99 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms