Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 ELOCP7-201ENST00000439968 331 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-420P-201ENST00000458780 107 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC010401.1-201ENST00000463867 348 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RN7SKP21-201ENST00000516503 220 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 Y_RNA.704-201ENST00000516851 102 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL670379.6-201ENST00000603753 252 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL670379.11-201ENST00000604059 253 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC008162.1-201ENST00000604718 254 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL670379.1-201ENST00000604752 252 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL670379.5-201ENST00000605253 252 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL670379.12-201ENST00000605291 253 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL670379.8-201ENST00000605353 252 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL670379.7-201ENST00000605823 252 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL121992.2-201ENST00000606262 256 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC093788.1-201ENST00000609356 927 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC002553.4-201ENST00000616896 331 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL513302.2-201ENST00000562313 1842 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 MTND5P17-201ENST00000418405 1603 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC004520.1-201ENST00000608362 1413 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 USP8P1-201ENST00000494673 3183 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 SNORA31-201ENST00000362607 130 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 MIR607-201ENST00000385241 96 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 MIR454-201ENST00000390180 115 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC068050.1-201ENST00000394891 380 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-908P-201ENST00000410160 94 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 ATP5A1P2-201ENST00000412323 255 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 OR51A5P-201ENST00000415429 942 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AL035423.1-201ENST00000420331 213 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 CYCSP43-201ENST00000438233 310 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 RPL7P54-201ENST00000438336 674 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 snoU13.4-201ENST00000458916 104 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 HSPE1P6-201ENST00000479457 291 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC092989.1-201ENST00000481235 277 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 RN7SL432P-201ENST00000484057 298 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 SNORA40.12-201ENST00000516329 111 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-1231P-201ENST00000517185 103 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AP001646.1-201ENST00000527936 915 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC234778.2-201ENST00000566241 354 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AL162413.1-201ENST00000603198 110 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC010591.1-201ENST00000603941 649 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AP001486.3-201ENST00000615334 372 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AC068831.8-201ENST00000620171 435 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 AP003355.3-201ENST00000623465 114 ntBASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TCRBV7S3A2A0A539 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 GABPAP-201ENST00000419271 1356 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 DEFB108F-201ENST00000344638 222 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 Y_RNA.89-201ENST00000363031 102 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 RN7SKP44-201ENST00000363602 316 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 RNA5SP189-201ENST00000364920 115 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 RNU2-9P-201ENST00000410194 145 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 ZNF90P2-204ENST00000419323 1075 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 RAC1P6-201ENST00000423911 575 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 AL606489.2-201ENST00000433886 234 ntBASIC3.53□□□□□ -1.84
TCRBV7S3A2A0A539 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms