Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU6-288P-201ENST00000363690 104 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 RNA5SP399-201ENST00000364003 117 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 RNU6-213P-201ENST00000384051 104 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 FCF1P9-201ENST00000412546 282 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 RPS12P24-201ENST00000412619 387 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC114491.1-201ENST00000416095 246 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 RPS3AP44-201ENST00000425466 790 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 RPL23AP69-201ENST00000431134 458 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 HMGN2P20-201ENST00000437531 273 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 BNIP3P2-201ENST00000441221 577 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC027673.1-201ENST00000456245 405 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AL356010.1-201ENST00000456364 102 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC126182.1-201ENST00000478134 357 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 APOOP4-201ENST00000513530 597 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 MTND4LP31-201ENST00000514859 294 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 RNA5SP179-201ENST00000517284 121 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 RANP3-201ENST00000530970 276 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 OR5AL2P-201ENST00000532185 920 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC011602.1-201ENST00000546484 331 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AL512310.1-201ENST00000548639 172 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC024619.4-201ENST00000580924 316 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AL161798.1-201ENST00000604630 131 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC091167.4-201ENST00000605079 184 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AL591424.2-201ENST00000617023 128 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC068137.3-201ENST00000639191 341 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 AC073869.6-201ENST00000640656 341 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 API5P2-201ENST00000397055 1498 ntBASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL4A3BPQ9Y5P4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 SNORA62.1-201ENST00000364287 154 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 RNU6-1322P-201ENST00000364309 107 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 RNU6-61P-201ENST00000365528 109 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 RPL17P50-201ENST00000396131 546 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 SOD2P1-201ENST00000396543 562 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 MIR1183-201ENST00000408856 89 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC092047.1-201ENST00000424997 240 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 C8orf59P1-201ENST00000429930 303 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC087650.1-201ENST00000431445 468 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 KCTD9P3-201ENST00000434597 1169 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 SETP5-201ENST00000437270 562 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC083863.1-201ENST00000438811 231 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 HMGB1P37-201ENST00000439613 609 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 HMGB3P11-201ENST00000440127 604 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC093392.2-201ENST00000450682 337 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 RNU7-63P-201ENST00000459054 62 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC146944.2-203ENST00000502493 354 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC139495.1-202ENST00000513164 354 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 YPEL5P3-201ENST00000547227 352 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC034105.4-201ENST00000568304 277 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 MIR3609-201ENST00000582661 80 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC006130.2-201ENST00000586202 326 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 BNIP3P9-201ENST00000603714 553 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AP001330.5-201ENST00000607176 411 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC022893.3-201ENST00000607665 437 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC012409.4-201ENST00000612923 249 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AP001486.3-201ENST00000615334 372 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC006111.3-201ENST00000622137 383 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 AC018555.1-201ENST00000567548 1980 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 MTND4P5-201ENST00000435821 1374 ntBASIC4.39□□□□□ -1.71
COL4A3BPQ9Y5P4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A3BPQ9Y5P4 RPL21P17-201ENST00000397467 475 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms